Gene
RNA
| Item | Value |
|---|---|
| gene id | G1686547 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 33133387 ~ 33133853 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1929076 | True | 467 | lncRNA | 0.37 | 1 | 33133387 | 33133853 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499532 | hpse2 | coding | upstream | 562 | 33063035 ~ 33132825 (+) |
| LOC110499344 | LOC106589763 | coding | upstream | 269998 | 32849697 ~ 32863389 (+) |
| LOC110499341 | LOC106589760 | coding | upstream | 373340 | 32747591 ~ 32760047 (+) |
| LOC110499338 | LOC106589757 | coding | upstream | 396657 | 32702791 ~ 32736730 (+) |
| LOC110499339 | LOC106589759 | coding | upstream | 430862 | 32690087 ~ 32702525 (+) |
| LOC118942060 | LOC106589768 | coding | downstream | 51211 | 33177293 ~ 33196167 (+) |
| LOC110499352 | LOC106589767 | coding | downstream | 82419 | 33216272 ~ 33262134 (+) |
| LOC110499354 | NA | coding | downstream | 341087 | 33474940 ~ 33517443 (+) |
| LOC118942063 | NA | coding | downstream | 394945 | 33528620 ~ 33530380 (+) |
| LOC110499362 | LOC106589783 | coding | downstream | 527468 | 33661321 ~ 33787514 (+) |
| G1686616 | NA | non-coding | upstream | 10227 | 33122827 ~ 33123160 (+) |
| G1686607 | NA | non-coding | upstream | 33653 | 33099512 ~ 33099734 (+) |
| G1686597 | NA | non-coding | upstream | 55551 | 33077533 ~ 33077836 (+) |
| G1686594 | NA | non-coding | upstream | 58769 | 33074408 ~ 33074618 (+) |
| G1686593 | NA | non-coding | upstream | 59817 | 33073327 ~ 33073570 (+) |
| G1686549 | NA | non-coding | downstream | 58 | 33133911 ~ 33134197 (+) |
| G1686630 | NA | non-coding | downstream | 11147 | 33145000 ~ 33145201 (+) |
| G1686631 | NA | non-coding | downstream | 12626 | 33146479 ~ 33146716 (+) |
| G1686632 | NA | non-coding | downstream | 12885 | 33146738 ~ 33147091 (+) |
| G1686636 | NA | non-coding | downstream | 33343 | 33167196 ~ 33169029 (+) |
| G1686317 | LOC106589755 | other | upstream | 471739 | 32654354 ~ 32661648 (+) |
| LOC110499316 | LOC106589729 | other | upstream | 3556829 | 29572397 ~ 29588171 (+) |
| lhcgr | lhr | other | upstream | 3675466 | 29437357 ~ 29458499 (+) |
| G1681792 | NA | other | upstream | 4354978 | 28778006 ~ 28778409 (+) |
| G1681180 | NA | other | upstream | 4406892 | 28717361 ~ 28726495 (+) |
| G1687675 | NA | other | downstream | 1191984 | 34325837 ~ 34326254 (+) |
| LOC110499396 | LOC106589821 | other | downstream | 2247856 | 35381609 ~ 35384567 (+) |
| G1689347 | NA | other | downstream | 2547514 | 35681367 ~ 35682437 (+) |
| LOC118942012 | LOC106589797 | other | downstream | 2567367 | 35701200 ~ 35702156 (+) |
