G1686630


Basic Information

Item Value
gene id G1686630
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 33145000 ~ 33145201 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1929178
CCCTGCTCCCTATGTTCTACAGTAGATATGAGGCCCCTAGCCCCTGCTCCCTATGTTCTACAGTAGATATGAGGCCCCTAGTCCCTGCTCCCTATGTTCTACAGTAAATATGAGGCCCCTAGTCCCTGCTCCCTATGTTCTACAGTAGATATGAGGCCCCTAGTCCCTGCTCCCTATGTTCTACAGTAGATATGAGGCCCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1929178 True 202 lncRNA 0.51 1 33145000 33145201

Neighbor

gene id symbol gene type direction distance location
LOC110499532 hpse2 coding upstream 12175 33063035 ~ 33132825 (+)
LOC110499344 LOC106589763 coding upstream 281611 32849697 ~ 32863389 (+)
LOC110499341 LOC106589760 coding upstream 384953 32747591 ~ 32760047 (+)
LOC110499338 LOC106589757 coding upstream 408270 32702791 ~ 32736730 (+)
LOC110499339 LOC106589759 coding upstream 442475 32690087 ~ 32702525 (+)
LOC118942060 LOC106589768 coding downstream 39863 33177293 ~ 33196167 (+)
LOC110499352 LOC106589767 coding downstream 71071 33216272 ~ 33262134 (+)
LOC110499354 NA coding downstream 329739 33474940 ~ 33517443 (+)
LOC118942063 NA coding downstream 383597 33528620 ~ 33530380 (+)
LOC110499362 LOC106589783 coding downstream 516120 33661321 ~ 33787514 (+)
G1686549 NA non-coding upstream 10803 33133911 ~ 33134197 (+)
G1686547 NA non-coding upstream 11147 33133387 ~ 33133853 (+)
G1686616 NA non-coding upstream 21840 33122827 ~ 33123160 (+)
G1686607 NA non-coding upstream 45266 33099512 ~ 33099734 (+)
G1686597 NA non-coding upstream 67164 33077533 ~ 33077836 (+)
G1686631 NA non-coding downstream 1278 33146479 ~ 33146716 (+)
G1686632 NA non-coding downstream 1537 33146738 ~ 33147091 (+)
G1686636 NA non-coding downstream 21995 33167196 ~ 33169029 (+)
G1686640 NA non-coding downstream 28841 33174042 ~ 33175013 (+)
G1686659 NA non-coding downstream 59087 33204288 ~ 33205058 (+)
G1686317 LOC106589755 other upstream 483352 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 3568442 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 3687079 29437357 ~ 29458499 (+)
G1681792 NA other upstream 4366591 28778006 ~ 28778409 (+)
G1681180 NA other upstream 4418505 28717361 ~ 28726495 (+)
G1687675 NA other downstream 1180636 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 2236508 35381609 ~ 35384567 (+)
G1689347 NA other downstream 2536166 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 2556019 35701200 ~ 35702156 (+)

Expression


Co-expression Network