G1686632


Basic Information

Item Value
gene id G1686632
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 33146738 ~ 33147091 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1929180
ctacctcattcccatactgtttttattttatttatttttctgctcttttgcacaccagtatctctacttgcacatcatcatctgctcatttatcactccagtgttaatctgctcaattgtaactattcgctcctatggcctatttattgcctacctcctcatgcctttagactttattttttctactgtgtcattgatttgtttattgtgttattggcttgtttattgtttactccatgtgtaactttgtgttgtctgtgtcacactgctttgctttatcttggccaggtcacagttgtaaatgagagcttgttctcaactagcctacctggttaaataaaggtgttctcaact

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1929180 True 354 lncRNA 0.37 1 33146738 33147091

Neighbor

gene id symbol gene type direction distance location
LOC110499532 hpse2 coding upstream 13913 33063035 ~ 33132825 (+)
LOC110499344 LOC106589763 coding upstream 283349 32849697 ~ 32863389 (+)
LOC110499341 LOC106589760 coding upstream 386691 32747591 ~ 32760047 (+)
LOC110499338 LOC106589757 coding upstream 410008 32702791 ~ 32736730 (+)
LOC110499339 LOC106589759 coding upstream 444213 32690087 ~ 32702525 (+)
LOC118942060 LOC106589768 coding downstream 37973 33177293 ~ 33196167 (+)
LOC110499352 LOC106589767 coding downstream 69181 33216272 ~ 33262134 (+)
LOC110499354 NA coding downstream 327849 33474940 ~ 33517443 (+)
LOC118942063 NA coding downstream 381707 33528620 ~ 33530380 (+)
LOC110499362 LOC106589783 coding downstream 514230 33661321 ~ 33787514 (+)
G1686631 NA non-coding upstream 22 33146479 ~ 33146716 (+)
G1686630 NA non-coding upstream 1537 33145000 ~ 33145201 (+)
G1686549 NA non-coding upstream 12541 33133911 ~ 33134197 (+)
G1686547 NA non-coding upstream 12885 33133387 ~ 33133853 (+)
G1686616 NA non-coding upstream 23578 33122827 ~ 33123160 (+)
G1686636 NA non-coding downstream 20105 33167196 ~ 33169029 (+)
G1686640 NA non-coding downstream 26951 33174042 ~ 33175013 (+)
G1686659 NA non-coding downstream 57197 33204288 ~ 33205058 (+)
G1686658 NA non-coding downstream 120727 33267818 ~ 33268441 (+)
G1686317 LOC106589755 other upstream 485090 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 3570180 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 3688817 29437357 ~ 29458499 (+)
G1681792 NA other upstream 4368329 28778006 ~ 28778409 (+)
G1681180 NA other upstream 4420243 28717361 ~ 28726495 (+)
G1687675 NA other downstream 1178746 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 2234618 35381609 ~ 35384567 (+)
G1689347 NA other downstream 2534276 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 2554129 35701200 ~ 35702156 (+)

Expression


Co-expression Network