G1686659


Basic Information

Item Value
gene id G1686659
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 33204288 ~ 33205058 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1929213
tctgaATTTAATTCAACCCATGAAATACCAAATTCTATTTCAATTGCCCACACCCCACAGAAAGCAGACTTTGAATTGAAGGAAGTAGACATTGAATTGAAGGAAGTAGACATTGAATTGAAGGAAGTACACATTGAATTCAAATCAATTTAACTGAGACATGAACGTTTCAACCTTTGACATGTATTTTACCAAAAGCATATGCAACTTATTACTACAAAGAAAACCCCATTTAAAATATGAACTTGATTATAACTCAGAGGTAATGTTAGGtttaacctacagtatgttatacataGTATTAGTAACTGTACATTGCGCATAGGCCAAGTTATGTGTATAATAAATTATACATTTgaatttaaataaaataCCTTTCATTCAAATTCAATTCTTCTTTCTGTGGAGTGTGGCTAATTCAAATTCAAGAATCCCCACAACCCTGGTGCATGACCCTGTTGTCCATCCCTGAGTGCCTGTATGAGGATGTTGTACCCTGGCCATGGTTGAGACCCATTGTTCCACCATTTTGGATCTAAGATGAGTTCAGTTGCTGAACAGCTAGCCACTCCTCATAGTGTCCTGGTGGGGTCTCGGGTGTCTGCAGGGTCATAGAGCCAGACTGCGGGCAGTGGAGGCGGCTCCCTGTGCCTGCAGTACCACCCCCTGGCACTTCTCCCTCTTCTGCAGCTTGTGGTTCTCAAACAGGCCCTCGTTACGCGGCACACCATGGTTCCCATCTGGAAACGTT

Function

NR:

description
PREDICTED: MORN repeat-containing protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1929213 True 751 lncRNA 0.42 2 33204288 33205058

Neighbor

gene id symbol gene type direction distance location
LOC118942060 LOC106589768 coding upstream 8121 33177293 ~ 33196167 (+)
LOC110499532 hpse2 coding upstream 71463 33063035 ~ 33132825 (+)
LOC110499344 LOC106589763 coding upstream 340899 32849697 ~ 32863389 (+)
LOC110499341 LOC106589760 coding upstream 444241 32747591 ~ 32760047 (+)
LOC110499338 LOC106589757 coding upstream 467558 32702791 ~ 32736730 (+)
LOC110499352 LOC106589767 coding downstream 11214 33216272 ~ 33262134 (+)
LOC110499354 NA coding downstream 269882 33474940 ~ 33517443 (+)
LOC118942063 NA coding downstream 323740 33528620 ~ 33530380 (+)
LOC110499362 LOC106589783 coding downstream 456263 33661321 ~ 33787514 (+)
rab23 LOC106589799 coding downstream 744694 33949752 ~ 33958728 (+)
G1686640 NA non-coding upstream 29275 33174042 ~ 33175013 (+)
G1686636 NA non-coding upstream 35259 33167196 ~ 33169029 (+)
G1686632 NA non-coding upstream 57197 33146738 ~ 33147091 (+)
G1686631 NA non-coding upstream 57572 33146479 ~ 33146716 (+)
G1686630 NA non-coding upstream 59087 33145000 ~ 33145201 (+)
G1686658 NA non-coding downstream 62760 33267818 ~ 33268441 (+)
G1686699 NA non-coding downstream 111960 33317018 ~ 33317263 (+)
G1686700 NA non-coding downstream 114737 33319795 ~ 33320009 (+)
G1686708 NA non-coding downstream 155431 33360489 ~ 33360959 (+)
G1686317 LOC106589755 other upstream 542640 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 3627730 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 3746367 29437357 ~ 29458499 (+)
G1681792 NA other upstream 4425879 28778006 ~ 28778409 (+)
G1687675 NA other downstream 1120779 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 2176651 35381609 ~ 35384567 (+)
G1689347 NA other downstream 2476309 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 2496162 35701200 ~ 35702156 (+)
G1689671 NA other downstream 2676520 35881578 ~ 35881874 (+)

Expression


Co-expression Network