Gene
RNA
| Item | Value |
|---|---|
| gene id | G1686658 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 33267818 ~ 33268441 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1929212 | True | 600 | lncRNA | 0.40 | 2 | 33267818 | 33268441 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499352 | LOC106589767 | coding | upstream | 5684 | 33216272 ~ 33262134 (+) |
| LOC118942060 | LOC106589768 | coding | upstream | 71651 | 33177293 ~ 33196167 (+) |
| LOC110499532 | hpse2 | coding | upstream | 134993 | 33063035 ~ 33132825 (+) |
| LOC110499344 | LOC106589763 | coding | upstream | 404429 | 32849697 ~ 32863389 (+) |
| LOC110499341 | LOC106589760 | coding | upstream | 507771 | 32747591 ~ 32760047 (+) |
| LOC110499354 | NA | coding | downstream | 206499 | 33474940 ~ 33517443 (+) |
| LOC118942063 | NA | coding | downstream | 260357 | 33528620 ~ 33530380 (+) |
| LOC110499362 | LOC106589783 | coding | downstream | 392880 | 33661321 ~ 33787514 (+) |
| rab23 | LOC106589799 | coding | downstream | 681311 | 33949752 ~ 33958728 (+) |
| LOC110499368 | LOC106589788 | coding | downstream | 716025 | 33984466 ~ 34178931 (+) |
| G1686659 | NA | non-coding | upstream | 62760 | 33204288 ~ 33205058 (+) |
| G1686640 | NA | non-coding | upstream | 92805 | 33174042 ~ 33175013 (+) |
| G1686636 | NA | non-coding | upstream | 98789 | 33167196 ~ 33169029 (+) |
| G1686632 | NA | non-coding | upstream | 120727 | 33146738 ~ 33147091 (+) |
| G1686699 | NA | non-coding | downstream | 48577 | 33317018 ~ 33317263 (+) |
| G1686700 | NA | non-coding | downstream | 51354 | 33319795 ~ 33320009 (+) |
| G1686708 | NA | non-coding | downstream | 92048 | 33360489 ~ 33360959 (+) |
| G1686710 | NA | non-coding | downstream | 98341 | 33366782 ~ 33366998 (+) |
| G1686711 | NA | non-coding | downstream | 100147 | 33368588 ~ 33368832 (+) |
| G1686317 | LOC106589755 | other | upstream | 606170 | 32654354 ~ 32661648 (+) |
| LOC110499316 | LOC106589729 | other | upstream | 3691260 | 29572397 ~ 29588171 (+) |
| lhcgr | lhr | other | upstream | 3809897 | 29437357 ~ 29458499 (+) |
| G1681792 | NA | other | upstream | 4489409 | 28778006 ~ 28778409 (+) |
| G1687675 | NA | other | downstream | 1057396 | 34325837 ~ 34326254 (+) |
| LOC110499396 | LOC106589821 | other | downstream | 2113268 | 35381609 ~ 35384567 (+) |
| G1689347 | NA | other | downstream | 2412926 | 35681367 ~ 35682437 (+) |
| LOC118942012 | LOC106589797 | other | downstream | 2432779 | 35701200 ~ 35702156 (+) |
| G1689671 | NA | other | downstream | 2613137 | 35881578 ~ 35881874 (+) |
