G1686699


Basic Information

Item Value
gene id G1686699
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 33317018 ~ 33317263 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1929254
GTTATAACTCAGGATCCTAGAATGATAAGAAACAGGCAGTACACCTTAACATATATCCCTCCTGTTATAACTCAGGATCCTAGAATGTTATATAAGAAACAGGCAGTACACCTTAACATATATCCCTCCTGTTATAACTCAGGATCATAGAATGATAAGAAACAGGCAGTACACCTTAACATATATCCCTCCTGTTATAACTCAGGATCCTAGAATGAGTAAGAAACAGGCAGTACACCTTAACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1929254 True 246 lncRNA 0.37 1 33317018 33317263

Neighbor

gene id symbol gene type direction distance location
LOC110499352 LOC106589767 coding upstream 54884 33216272 ~ 33262134 (+)
LOC118942060 LOC106589768 coding upstream 120851 33177293 ~ 33196167 (+)
LOC110499532 hpse2 coding upstream 184193 33063035 ~ 33132825 (+)
LOC110499344 LOC106589763 coding upstream 453629 32849697 ~ 32863389 (+)
LOC110499341 LOC106589760 coding upstream 556971 32747591 ~ 32760047 (+)
LOC110499354 NA coding downstream 157677 33474940 ~ 33517443 (+)
LOC118942063 NA coding downstream 211535 33528620 ~ 33530380 (+)
LOC110499362 LOC106589783 coding downstream 344058 33661321 ~ 33787514 (+)
rab23 LOC106589799 coding downstream 632489 33949752 ~ 33958728 (+)
LOC110499368 LOC106589788 coding downstream 667203 33984466 ~ 34178931 (+)
G1686658 NA non-coding upstream 48577 33267818 ~ 33268441 (+)
G1686659 NA non-coding upstream 111960 33204288 ~ 33205058 (+)
G1686640 NA non-coding upstream 142005 33174042 ~ 33175013 (+)
G1686636 NA non-coding upstream 147989 33167196 ~ 33169029 (+)
G1686700 NA non-coding downstream 2532 33319795 ~ 33320009 (+)
G1686708 NA non-coding downstream 43226 33360489 ~ 33360959 (+)
G1686710 NA non-coding downstream 49519 33366782 ~ 33366998 (+)
G1686711 NA non-coding downstream 51325 33368588 ~ 33368832 (+)
G1686713 NA non-coding downstream 54778 33372041 ~ 33372575 (+)
G1686317 LOC106589755 other upstream 655370 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 3740460 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 3859097 29437357 ~ 29458499 (+)
G1681792 NA other upstream 4538609 28778006 ~ 28778409 (+)
G1687675 NA other downstream 1008574 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 2064446 35381609 ~ 35384567 (+)
G1689347 NA other downstream 2364104 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 2383957 35701200 ~ 35702156 (+)
G1689671 NA other downstream 2564315 35881578 ~ 35881874 (+)

Expression


Co-expression Network