Gene
RNA
| Item | Value |
|---|---|
| gene id | G1686710 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 33366782 ~ 33366998 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1929265 | True | 217 | lncRNA | 0.44 | 1 | 33366782 | 33366998 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499352 | LOC106589767 | coding | upstream | 104648 | 33216272 ~ 33262134 (+) |
| LOC118942060 | LOC106589768 | coding | upstream | 170615 | 33177293 ~ 33196167 (+) |
| LOC110499532 | hpse2 | coding | upstream | 233957 | 33063035 ~ 33132825 (+) |
| LOC110499344 | LOC106589763 | coding | upstream | 503393 | 32849697 ~ 32863389 (+) |
| LOC110499341 | LOC106589760 | coding | upstream | 606735 | 32747591 ~ 32760047 (+) |
| LOC110499354 | NA | coding | downstream | 107942 | 33474940 ~ 33517443 (+) |
| LOC118942063 | NA | coding | downstream | 161800 | 33528620 ~ 33530380 (+) |
| LOC110499362 | LOC106589783 | coding | downstream | 294323 | 33661321 ~ 33787514 (+) |
| rab23 | LOC106589799 | coding | downstream | 582754 | 33949752 ~ 33958728 (+) |
| LOC110499368 | LOC106589788 | coding | downstream | 617468 | 33984466 ~ 34178931 (+) |
| G1686708 | NA | non-coding | upstream | 5823 | 33360489 ~ 33360959 (+) |
| G1686700 | NA | non-coding | upstream | 46773 | 33319795 ~ 33320009 (+) |
| G1686699 | NA | non-coding | upstream | 49519 | 33317018 ~ 33317263 (+) |
| G1686658 | NA | non-coding | upstream | 98341 | 33267818 ~ 33268441 (+) |
| G1686711 | NA | non-coding | downstream | 1590 | 33368588 ~ 33368832 (+) |
| G1686713 | NA | non-coding | downstream | 5043 | 33372041 ~ 33372575 (+) |
| G1686724 | NA | non-coding | downstream | 40188 | 33407186 ~ 33407585 (+) |
| G1686730 | NA | non-coding | downstream | 58856 | 33425854 ~ 33454646 (+) |
| G1686745 | NA | non-coding | downstream | 87701 | 33454699 ~ 33454923 (+) |
| G1686317 | LOC106589755 | other | upstream | 705134 | 32654354 ~ 32661648 (+) |
| LOC110499316 | LOC106589729 | other | upstream | 3790224 | 29572397 ~ 29588171 (+) |
| lhcgr | lhr | other | upstream | 3908861 | 29437357 ~ 29458499 (+) |
| G1681792 | NA | other | upstream | 4588373 | 28778006 ~ 28778409 (+) |
| G1687675 | NA | other | downstream | 958839 | 34325837 ~ 34326254 (+) |
| LOC110499396 | LOC106589821 | other | downstream | 2014711 | 35381609 ~ 35384567 (+) |
| G1689347 | NA | other | downstream | 2314369 | 35681367 ~ 35682437 (+) |
| LOC118942012 | LOC106589797 | other | downstream | 2334222 | 35701200 ~ 35702156 (+) |
| G1689671 | NA | other | downstream | 2514580 | 35881578 ~ 35881874 (+) |
