G1686730


Basic Information

Item Value
gene id G1686730
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 33425854 ~ 33454646 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1929287
gaaagtaaaggggctgaataattttgcatgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaagaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtaccacta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1929287 True 230 lncRNA 0.36 2 33425854 33454646

Neighbor

gene id symbol gene type direction distance location
LOC110499352 LOC106589767 coding upstream 163720 33216272 ~ 33262134 (+)
LOC118942060 LOC106589768 coding upstream 229687 33177293 ~ 33196167 (+)
LOC110499532 hpse2 coding upstream 293029 33063035 ~ 33132825 (+)
LOC110499344 LOC106589763 coding upstream 562465 32849697 ~ 32863389 (+)
LOC110499341 LOC106589760 coding upstream 665807 32747591 ~ 32760047 (+)
LOC110499354 NA coding downstream 20294 33474940 ~ 33517443 (+)
LOC118942063 NA coding downstream 74152 33528620 ~ 33530380 (+)
LOC110499362 LOC106589783 coding downstream 206675 33661321 ~ 33787514 (+)
rab23 LOC106589799 coding downstream 495106 33949752 ~ 33958728 (+)
LOC110499368 LOC106589788 coding downstream 529820 33984466 ~ 34178931 (+)
G1686724 NA non-coding upstream 18269 33407186 ~ 33407585 (+)
G1686713 NA non-coding upstream 53279 33372041 ~ 33372575 (+)
G1686711 NA non-coding upstream 57022 33368588 ~ 33368832 (+)
G1686710 NA non-coding upstream 58856 33366782 ~ 33366998 (+)
G1686708 NA non-coding upstream 64895 33360489 ~ 33360959 (+)
G1686745 NA non-coding downstream 53 33454699 ~ 33454923 (+)
G1686748 NA non-coding downstream 5956 33460602 ~ 33460804 (+)
G1686758 NA non-coding downstream 21971 33476617 ~ 33477147 (+)
G1686759 NA non-coding downstream 33533 33488179 ~ 33502409 (+)
G1686760 LOC106589782 non-coding downstream 36942 33491588 ~ 33506057 (+)
G1686317 LOC106589755 other upstream 764206 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 3849296 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 3967933 29437357 ~ 29458499 (+)
G1681792 NA other upstream 4647445 28778006 ~ 28778409 (+)
G1687675 NA other downstream 871191 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 1927063 35381609 ~ 35384567 (+)
G1689347 NA other downstream 2226721 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 2246574 35701200 ~ 35702156 (+)
G1689671 NA other downstream 2426932 35881578 ~ 35881874 (+)

Expression


Co-expression Network