Gene
RNA
| Item | Value |
|---|---|
| gene id | G1686759 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 33488179 ~ 33502409 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1929321 | True | 576 | lncRNA | 0.34 | 2 | 33488179 | 33502409 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499352 | LOC106589767 | coding | upstream | 226045 | 33216272 ~ 33262134 (+) |
| LOC118942060 | LOC106589768 | coding | upstream | 292012 | 33177293 ~ 33196167 (+) |
| LOC110499532 | hpse2 | coding | upstream | 355354 | 33063035 ~ 33132825 (+) |
| LOC110499344 | LOC106589763 | coding | upstream | 624790 | 32849697 ~ 32863389 (+) |
| LOC110499341 | LOC106589760 | coding | upstream | 728132 | 32747591 ~ 32760047 (+) |
| LOC118942063 | NA | coding | downstream | 26389 | 33528620 ~ 33530380 (+) |
| LOC110499362 | LOC106589783 | coding | downstream | 158912 | 33661321 ~ 33787514 (+) |
| rab23 | LOC106589799 | coding | downstream | 447343 | 33949752 ~ 33958728 (+) |
| LOC110499368 | LOC106589788 | coding | downstream | 482057 | 33984466 ~ 34178931 (+) |
| zmp:0000000760 | LOC106589800 | coding | downstream | 681671 | 34184080 ~ 34208986 (+) |
| G1686758 | NA | non-coding | upstream | 11032 | 33476617 ~ 33477147 (+) |
| G1686748 | NA | non-coding | upstream | 27375 | 33460602 ~ 33460804 (+) |
| G1686745 | NA | non-coding | upstream | 33256 | 33454699 ~ 33454923 (+) |
| G1686730 | NA | non-coding | upstream | 33533 | 33425854 ~ 33454646 (+) |
| G1686724 | NA | non-coding | upstream | 80594 | 33407186 ~ 33407585 (+) |
| G1686753 | LOC106589781 | non-coding | downstream | 31270 | 33533679 ~ 33559019 (+) |
| G1687114 | NA | non-coding | downstream | 102829 | 33605238 ~ 33605655 (+) |
| G1687142 | NA | non-coding | downstream | 123532 | 33625941 ~ 33626164 (+) |
| G1687156 | NA | non-coding | downstream | 134729 | 33637138 ~ 33637356 (+) |
| G1686317 | LOC106589755 | other | upstream | 826531 | 32654354 ~ 32661648 (+) |
| LOC110499316 | LOC106589729 | other | upstream | 3911621 | 29572397 ~ 29588171 (+) |
| lhcgr | lhr | other | upstream | 4030258 | 29437357 ~ 29458499 (+) |
| G1681792 | NA | other | upstream | 4709770 | 28778006 ~ 28778409 (+) |
| G1687675 | NA | other | downstream | 823428 | 34325837 ~ 34326254 (+) |
| LOC110499396 | LOC106589821 | other | downstream | 1879300 | 35381609 ~ 35384567 (+) |
| G1689347 | NA | other | downstream | 2178958 | 35681367 ~ 35682437 (+) |
| LOC118942012 | LOC106589797 | other | downstream | 2198811 | 35701200 ~ 35702156 (+) |
| G1689671 | NA | other | downstream | 2379169 | 35881578 ~ 35881874 (+) |
