Item | Value |
---|---|
gene id | G1686760 |
gene name | LOC106589782 |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048584.1 |
NCBI id | CM023238.2 |
chromosome length | 46616863 |
location | 33491588 ~ 33506057 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
tripartite motif-containing protein 35-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1929323 | True | 808 | lncRNA | 0.41 | 2 | 33491588 | 33506057 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110499352 | LOC106589767 | coding | upstream | 229454 | 33216272 ~ 33262134 (+) |
LOC118942060 | LOC106589768 | coding | upstream | 295421 | 33177293 ~ 33196167 (+) |
LOC110499532 | hpse2 | coding | upstream | 358763 | 33063035 ~ 33132825 (+) |
LOC110499344 | LOC106589763 | coding | upstream | 628199 | 32849697 ~ 32863389 (+) |
LOC110499341 | LOC106589760 | coding | upstream | 731541 | 32747591 ~ 32760047 (+) |
LOC118942063 | NA | coding | downstream | 22741 | 33528620 ~ 33530380 (+) |
LOC110499362 | LOC106589783 | coding | downstream | 155264 | 33661321 ~ 33787514 (+) |
rab23 | LOC106589799 | coding | downstream | 443695 | 33949752 ~ 33958728 (+) |
LOC110499368 | LOC106589788 | coding | downstream | 478409 | 33984466 ~ 34178931 (+) |
zmp:0000000760 | LOC106589800 | coding | downstream | 678023 | 34184080 ~ 34208986 (+) |
G1686758 | NA | non-coding | upstream | 14441 | 33476617 ~ 33477147 (+) |
G1686748 | NA | non-coding | upstream | 30784 | 33460602 ~ 33460804 (+) |
G1686745 | NA | non-coding | upstream | 36665 | 33454699 ~ 33454923 (+) |
G1686730 | NA | non-coding | upstream | 36942 | 33425854 ~ 33454646 (+) |
G1686724 | NA | non-coding | upstream | 84003 | 33407186 ~ 33407585 (+) |
G1686753 | LOC106589781 | non-coding | downstream | 27622 | 33533679 ~ 33559019 (+) |
G1687114 | NA | non-coding | downstream | 99181 | 33605238 ~ 33605655 (+) |
G1687142 | NA | non-coding | downstream | 119884 | 33625941 ~ 33626164 (+) |
G1687156 | NA | non-coding | downstream | 131081 | 33637138 ~ 33637356 (+) |
G1686317 | LOC106589755 | other | upstream | 829940 | 32654354 ~ 32661648 (+) |
LOC110499316 | LOC106589729 | other | upstream | 3915030 | 29572397 ~ 29588171 (+) |
lhcgr | lhr | other | upstream | 4033667 | 29437357 ~ 29458499 (+) |
G1681792 | NA | other | upstream | 4713179 | 28778006 ~ 28778409 (+) |
G1687675 | NA | other | downstream | 819780 | 34325837 ~ 34326254 (+) |
LOC110499396 | LOC106589821 | other | downstream | 1875652 | 35381609 ~ 35384567 (+) |
G1689347 | NA | other | downstream | 2175310 | 35681367 ~ 35682437 (+) |
LOC118942012 | LOC106589797 | other | downstream | 2195163 | 35701200 ~ 35702156 (+) |
G1689671 | NA | other | downstream | 2375521 | 35881578 ~ 35881874 (+) |