Gene
RNA
| Item | Value |
|---|---|
| gene id | G1687212 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 33689435 ~ 33689903 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1929859 | True | 441 | lncRNA | 0.39 | 2 | 33689435 | 33689903 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942063 | NA | coding | upstream | 159956 | 33528620 ~ 33530380 (+) |
| LOC110499354 | NA | coding | upstream | 171992 | 33474940 ~ 33517443 (+) |
| LOC110499352 | LOC106589767 | coding | upstream | 427301 | 33216272 ~ 33262134 (+) |
| LOC118942060 | LOC106589768 | coding | upstream | 493268 | 33177293 ~ 33196167 (+) |
| LOC110499532 | hpse2 | coding | upstream | 556610 | 33063035 ~ 33132825 (+) |
| rab23 | LOC106589799 | coding | downstream | 259849 | 33949752 ~ 33958728 (+) |
| LOC110499368 | LOC106589788 | coding | downstream | 294563 | 33984466 ~ 34178931 (+) |
| zmp:0000000760 | LOC106589800 | coding | downstream | 494177 | 34184080 ~ 34208986 (+) |
| col21a1 | LOC106589801 | coding | downstream | 535968 | 34225871 ~ 34271548 (+) |
| bmp5 | LOC106589803 | coding | downstream | 583964 | 34273867 ~ 34312150 (+) |
| G1687188 | NA | non-coding | upstream | 29581 | 33659402 ~ 33659854 (+) |
| G1687156 | NA | non-coding | upstream | 52079 | 33637138 ~ 33637356 (+) |
| G1687142 | NA | non-coding | upstream | 63271 | 33625941 ~ 33626164 (+) |
| G1687114 | NA | non-coding | upstream | 83780 | 33605238 ~ 33605655 (+) |
| G1686753 | LOC106589781 | non-coding | upstream | 130416 | 33533679 ~ 33559019 (+) |
| G1687439 | NA | non-coding | downstream | 164735 | 33854638 ~ 33854910 (+) |
| G1687456 | NA | non-coding | downstream | 173233 | 33863136 ~ 33863392 (+) |
| G1687463 | NA | non-coding | downstream | 178914 | 33868817 ~ 33869241 (+) |
| G1687496 | NA | non-coding | downstream | 205831 | 33895734 ~ 33895971 (+) |
| G1687545 | bag2 | non-coding | downstream | 277196 | 33967099 ~ 33970046 (+) |
| G1686317 | LOC106589755 | other | upstream | 1027787 | 32654354 ~ 32661648 (+) |
| LOC110499316 | LOC106589729 | other | upstream | 4112877 | 29572397 ~ 29588171 (+) |
| lhcgr | lhr | other | upstream | 4231514 | 29437357 ~ 29458499 (+) |
| G1681792 | NA | other | upstream | 4911026 | 28778006 ~ 28778409 (+) |
| G1687675 | NA | other | downstream | 635934 | 34325837 ~ 34326254 (+) |
| LOC110499396 | LOC106589821 | other | downstream | 1691806 | 35381609 ~ 35384567 (+) |
| G1689347 | NA | other | downstream | 1991464 | 35681367 ~ 35682437 (+) |
| LOC118942012 | LOC106589797 | other | downstream | 2011317 | 35701200 ~ 35702156 (+) |
| G1689671 | NA | other | downstream | 2191675 | 35881578 ~ 35881874 (+) |
