G1687448



Basic Information


Item Value
gene id G1687448
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 33859879 ~ 33860350 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1930109
CATGAAATTATTGGTGACTGGacatgtgattttagcttctaaaatgtgagaattgggttttcataaggttagtgctcaatcagtggcccgcccctgtgaagagtcatgggttataaaacttttcaaacacgccctcctctcccttcccataTAAAGCCTTGACAACAATATAACCTTCTGTtctgaggatgtgaggacgacggtccaatgtcagaatggttcagataataactacagaacgaagccaacatcagcgtgagctttggttgcgaatggtatgaactttgaactcttattcactacagaagtgatacctcctagccgttaagttagcaacagcagctgcaaacgaggttaggaaggaacagacagagtatcccgtctatcacacaacgacgttactacaacgtatccaattgaccaccagagacattcttcaaaggacttggtttggcaacacggccttccatct

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1930109 True 472 lncRNA 0.44 1 33859879 33860350

Neighbor


gene id symbol gene type direction distance location
LOC110499361 LOC106589781 coding downstream 281679 33545819 ~ 33578200 (-)
LOC110499360 LOC106589782 coding downstream 315606 33524385 ~ 33544273 (-)
LOC110499358 LOC106589782 coding downstream 324654 33530945 ~ 33535225 (-)
LOC118942061 LOC106589782 coding downstream 338973 33517650 ~ 33520906 (-)
LOC118942062 LOC106589782 coding downstream 345268 33503010 ~ 33514611 (-)
bag2 bag2 coding upstream 108738 33969088 ~ 33971824 (-)
znf451 znf451 coding upstream 111792 33972142 ~ 33983890 (-)
trnav-uac-22 NA coding upstream 272052 34132402 ~ 34132477 (-)
gfral LOC106589804 coding upstream 519688 34380038 ~ 34389585 (-)
hcrtr2 hcrtr2 coding upstream 529720 34390070 ~ 34406831 (-)
G1687443 LOC106579309 non-coding downstream 2373 33857190 ~ 33857506 (-)
G1687440 NA non-coding downstream 4886 33854520 ~ 33854993 (-)
G1687432 NA non-coding downstream 9272 33850372 ~ 33850607 (-)
G1687385 NA non-coding downstream 72405 33786097 ~ 33787474 (-)
G1687183 NA non-coding downstream 205402 33654140 ~ 33654477 (-)
G1687450 NA non-coding upstream 645 33860995 ~ 33861219 (-)
G1687455 NA non-coding upstream 2493 33862843 ~ 33863043 (-)
G1687494 NA non-coding upstream 33169 33893519 ~ 33893746 (-)
G1687502 NA non-coding upstream 37755 33898105 ~ 33898398 (-)
G1687918 NA non-coding upstream 39154 33899504 ~ 33954155 (-)
G1687007 LOC106589782 other downstream 315641 33531084 ~ 33544238 (-)
G1686887 NA other downstream 781852 33077810 ~ 33078027 (-)
LOC110499342 LOC106589762 other downstream 1047025 32810995 ~ 32812999 (-)
G1684920 NA other downstream 2447035 31407594 ~ 31412844 (-)
G1689130 NA other upstream 1398639 35258989 ~ 35259818 (-)
G1689131 NA other upstream 1399536 35259886 ~ 35260208 (-)
G1689461 NA other upstream 1617764 35478114 ~ 35480057 (-)
G1689556 NA other upstream 1783018 35643368 ~ 35643777 (-)
LOC110499416 dnah17 other upstream 2005350 35864651 ~ 35951415 (-)

Expression



Co-expression Network