G1687456


Basic Information

Item Value
gene id G1687456
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 33863136 ~ 33863392 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1930117
acaccaaggcctgtactctggagcgggatcgatttgtaggtggagggtccgtcatgatctggggcggtgtgtcacagcatcatcggactgagcttgttgtcattccaggcaatctcaacgctgtgcgttacagggaagacatcctcctccctcatgtggtacccttcctgcaggctcatcctgacatgaccctccagcatgacaatgccaccagccatagtgctcgttctgtgcttgatttcctgcaagacaggaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1930117 True 257 lncRNA 0.54 1 33863136 33863392

Neighbor

gene id symbol gene type direction distance location
LOC110499362 LOC106589783 coding upstream 75622 33661321 ~ 33787514 (+)
LOC118942063 NA coding upstream 333657 33528620 ~ 33530380 (+)
LOC110499354 NA coding upstream 345693 33474940 ~ 33517443 (+)
LOC110499352 LOC106589767 coding upstream 601002 33216272 ~ 33262134 (+)
LOC118942060 LOC106589768 coding upstream 666969 33177293 ~ 33196167 (+)
rab23 LOC106589799 coding downstream 86360 33949752 ~ 33958728 (+)
LOC110499368 LOC106589788 coding downstream 121074 33984466 ~ 34178931 (+)
zmp:0000000760 LOC106589800 coding downstream 320688 34184080 ~ 34208986 (+)
col21a1 LOC106589801 coding downstream 362479 34225871 ~ 34271548 (+)
bmp5 LOC106589803 coding downstream 410475 34273867 ~ 34312150 (+)
G1687439 NA non-coding upstream 8226 33854638 ~ 33854910 (+)
G1687212 NA non-coding upstream 173233 33689435 ~ 33689903 (+)
G1687188 NA non-coding upstream 203282 33659402 ~ 33659854 (+)
G1687156 NA non-coding upstream 225780 33637138 ~ 33637356 (+)
G1687142 NA non-coding upstream 236972 33625941 ~ 33626164 (+)
G1687463 NA non-coding downstream 5425 33868817 ~ 33869241 (+)
G1687496 NA non-coding downstream 32342 33895734 ~ 33895971 (+)
G1687545 bag2 non-coding downstream 103707 33967099 ~ 33970046 (+)
G1687581 NA non-coding downstream 157068 34020460 ~ 34020756 (+)
G1687627 NA non-coding downstream 348141 34211533 ~ 34211909 (+)
G1686317 LOC106589755 other upstream 1201488 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 4286578 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 4405215 29437357 ~ 29458499 (+)
G1681792 NA other upstream 5084727 28778006 ~ 28778409 (+)
G1687675 NA other downstream 462445 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 1518317 35381609 ~ 35384567 (+)
G1689347 NA other downstream 1817975 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 1837828 35701200 ~ 35702156 (+)
G1689671 NA other downstream 2018186 35881578 ~ 35881874 (+)

Expression


Co-expression Network