Gene
RNA
| Item | Value |
|---|---|
| gene id | G1687463 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 33868817 ~ 33869241 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1930124 | True | 425 | lncRNA | 0.50 | 1 | 33868817 | 33869241 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499362 | LOC106589783 | coding | upstream | 81303 | 33661321 ~ 33787514 (+) |
| LOC118942063 | NA | coding | upstream | 339338 | 33528620 ~ 33530380 (+) |
| LOC110499354 | NA | coding | upstream | 351374 | 33474940 ~ 33517443 (+) |
| LOC110499352 | LOC106589767 | coding | upstream | 606683 | 33216272 ~ 33262134 (+) |
| LOC118942060 | LOC106589768 | coding | upstream | 672650 | 33177293 ~ 33196167 (+) |
| rab23 | LOC106589799 | coding | downstream | 80511 | 33949752 ~ 33958728 (+) |
| LOC110499368 | LOC106589788 | coding | downstream | 115225 | 33984466 ~ 34178931 (+) |
| zmp:0000000760 | LOC106589800 | coding | downstream | 314839 | 34184080 ~ 34208986 (+) |
| col21a1 | LOC106589801 | coding | downstream | 356630 | 34225871 ~ 34271548 (+) |
| bmp5 | LOC106589803 | coding | downstream | 404626 | 34273867 ~ 34312150 (+) |
| G1687456 | NA | non-coding | upstream | 5425 | 33863136 ~ 33863392 (+) |
| G1687439 | NA | non-coding | upstream | 13907 | 33854638 ~ 33854910 (+) |
| G1687212 | NA | non-coding | upstream | 178914 | 33689435 ~ 33689903 (+) |
| G1687188 | NA | non-coding | upstream | 208963 | 33659402 ~ 33659854 (+) |
| G1687156 | NA | non-coding | upstream | 231461 | 33637138 ~ 33637356 (+) |
| G1687496 | NA | non-coding | downstream | 26493 | 33895734 ~ 33895971 (+) |
| G1687545 | bag2 | non-coding | downstream | 97858 | 33967099 ~ 33970046 (+) |
| G1687581 | NA | non-coding | downstream | 151219 | 34020460 ~ 34020756 (+) |
| G1687627 | NA | non-coding | downstream | 342292 | 34211533 ~ 34211909 (+) |
| G1687628 | NA | non-coding | downstream | 343142 | 34212383 ~ 34212610 (+) |
| G1686317 | LOC106589755 | other | upstream | 1207169 | 32654354 ~ 32661648 (+) |
| LOC110499316 | LOC106589729 | other | upstream | 4292259 | 29572397 ~ 29588171 (+) |
| lhcgr | lhr | other | upstream | 4410896 | 29437357 ~ 29458499 (+) |
| G1681792 | NA | other | upstream | 5090408 | 28778006 ~ 28778409 (+) |
| G1687675 | NA | other | downstream | 456596 | 34325837 ~ 34326254 (+) |
| LOC110499396 | LOC106589821 | other | downstream | 1512468 | 35381609 ~ 35384567 (+) |
| G1689347 | NA | other | downstream | 1812126 | 35681367 ~ 35682437 (+) |
| LOC118942012 | LOC106589797 | other | downstream | 1831979 | 35701200 ~ 35702156 (+) |
| G1689671 | NA | other | downstream | 2012337 | 35881578 ~ 35881874 (+) |
