G1687496


Basic Information

Item Value
gene id G1687496
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 33895734 ~ 33895971 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1930157
gggtccagaacggcaggcagtctcagggtcagggcaggcaggggtcaataatcctgTGAGGTGGGGCAAGGTATAGaatggcaggctcagggtcagggcaggcagaacggtcaaAACTGGGAAGGACTAAAAAAACAGGAGCAagaaacaggcaggagcaggggaacaaacgctggtaggtttcacaaacaaaacgaactggcaacagacagagaacacaggtataaatacacagggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1930157 True 238 lncRNA 0.53 1 33895734 33895971

Neighbor

gene id symbol gene type direction distance location
LOC110499362 LOC106589783 coding upstream 108220 33661321 ~ 33787514 (+)
LOC118942063 NA coding upstream 366255 33528620 ~ 33530380 (+)
LOC110499354 NA coding upstream 378291 33474940 ~ 33517443 (+)
LOC110499352 LOC106589767 coding upstream 633600 33216272 ~ 33262134 (+)
LOC118942060 LOC106589768 coding upstream 699567 33177293 ~ 33196167 (+)
rab23 LOC106589799 coding downstream 53781 33949752 ~ 33958728 (+)
LOC110499368 LOC106589788 coding downstream 88495 33984466 ~ 34178931 (+)
zmp:0000000760 LOC106589800 coding downstream 288109 34184080 ~ 34208986 (+)
col21a1 LOC106589801 coding downstream 329900 34225871 ~ 34271548 (+)
bmp5 LOC106589803 coding downstream 377896 34273867 ~ 34312150 (+)
G1687463 NA non-coding upstream 26493 33868817 ~ 33869241 (+)
G1687456 NA non-coding upstream 32342 33863136 ~ 33863392 (+)
G1687439 NA non-coding upstream 40824 33854638 ~ 33854910 (+)
G1687212 NA non-coding upstream 205831 33689435 ~ 33689903 (+)
G1687188 NA non-coding upstream 235880 33659402 ~ 33659854 (+)
G1687545 bag2 non-coding downstream 71128 33967099 ~ 33970046 (+)
G1687581 NA non-coding downstream 124489 34020460 ~ 34020756 (+)
G1687627 NA non-coding downstream 315562 34211533 ~ 34211909 (+)
G1687628 NA non-coding downstream 316412 34212383 ~ 34212610 (+)
G1687674 NA non-coding downstream 429396 34325367 ~ 34325584 (+)
G1686317 LOC106589755 other upstream 1234086 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 4319176 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 4437813 29437357 ~ 29458499 (+)
G1681792 NA other upstream 5117325 28778006 ~ 28778409 (+)
G1687675 NA other downstream 429866 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 1485738 35381609 ~ 35384567 (+)
G1689347 NA other downstream 1785396 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 1805249 35701200 ~ 35702156 (+)
G1689671 NA other downstream 1985607 35881578 ~ 35881874 (+)

Expression


Co-expression Network