G1688104



Basic Information


Item Value
gene id G1688104
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 34179273 ~ 34179488 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1930862
ttcgacctcatggcttggtttttgctctgacatgcactgtcaactgtgagaccttatatagacagatgtgtgcctttccaaatcatgtccaatcaattgaattaaccacaggtggactccaatcaagttgtagaaacatctcaagggtgatcaatggaaacaggatgcacctgagctcaatttcgagtctcatagcaaaggttctgaataccaatg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1930862 True 216 lncRNA 0.42 1 34179273 34179488

Neighbor


gene id symbol gene type direction distance location
trnav-uac-22 NA coding downstream 46796 34132402 ~ 34132477 (-)
znf451 znf451 coding downstream 195383 33972142 ~ 33983890 (-)
bag2 bag2 coding downstream 207449 33969088 ~ 33971824 (-)
LOC110499535 NA coding downstream 240783 33850060 ~ 33938490 (-)
LOC110499361 LOC106589781 coding downstream 601073 33545819 ~ 33578200 (-)
gfral LOC106589804 coding upstream 200550 34380038 ~ 34389585 (-)
hcrtr2 hcrtr2 coding upstream 210582 34390070 ~ 34406831 (-)
fam83b LOC106589806 coding upstream 234861 34414349 ~ 34435461 (-)
mlip LOC106589807 coding upstream 275075 34454563 ~ 34498964 (-)
lrrc1 LOC106589808 coding upstream 337750 34517238 ~ 34557314 (-)
G1688056 NA non-coding downstream 83686 34093224 ~ 34095587 (-)
G1687999 NA non-coding downstream 155146 34023093 ~ 34024127 (-)
G1687994 NA non-coding downstream 166082 34012808 ~ 34013191 (-)
G1687978 NA non-coding downstream 184466 33994460 ~ 33994807 (-)
G1687918 NA non-coding downstream 225118 33899504 ~ 33954155 (-)
G1688106 NA non-coding upstream 2707 34182195 ~ 34182414 (-)
G1688184 NA non-coding upstream 151566 34331054 ~ 34331340 (-)
G1688185 NA non-coding upstream 151942 34331430 ~ 34331638 (-)
G1688186 NA non-coding upstream 152392 34331880 ~ 34332091 (-)
G1688188 NA non-coding upstream 154359 34333847 ~ 34334149 (-)
G1687007 LOC106589782 other downstream 635035 33531084 ~ 33544238 (-)
LOC110499358 LOC106589782 other downstream 644997 33530945 ~ 33535225 (-)
G1686887 NA other downstream 1101246 33077810 ~ 33078027 (-)
LOC110499342 LOC106589762 other downstream 1366419 32810995 ~ 32812999 (-)
G1684920 NA other downstream 2766429 31407594 ~ 31412844 (-)
G1689130 NA other upstream 1079501 35258989 ~ 35259818 (-)
G1689131 NA other upstream 1080398 35259886 ~ 35260208 (-)
G1689461 NA other upstream 1298626 35478114 ~ 35480057 (-)
G1689556 NA other upstream 1463880 35643368 ~ 35643777 (-)
LOC110499416 dnah17 other upstream 1686212 35864651 ~ 35951415 (-)

Expression



Co-expression Network