G1687627


Basic Information

Item Value
gene id G1687627
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 34211533 ~ 34211909 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1930326
cctttacacttgtagtgtaaggtagttgttgtgaaattgttaggttagattactcgttggttattagtgcattgtcggaactagaagcacaagcattttgatacactcgcattaacatctgctaaccatgtgtatgtgacaaatgaaatttgatttgatttgatttgagatgctgtggcatgacctcaagagagtggttcacaccagacatcccaagaatattgtggaactgaaacagttttgtaaagaggaatggtccaaaattcctcctgaccgttgtgcaggtctgatccgcaactacagaaaacgtttggttgaggttattgctgccaaaggagggtcaaccggttctttttccaacctgcactgtgaatgtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1930326 True 377 lncRNA 0.41 1 34211533 34211909

Neighbor

gene id symbol gene type direction distance location
zmp:0000000760 LOC106589800 coding upstream 2547 34184080 ~ 34208986 (+)
LOC110499368 LOC106589788 coding upstream 32602 33984466 ~ 34178931 (+)
rab23 LOC106589799 coding upstream 252805 33949752 ~ 33958728 (+)
LOC110499362 LOC106589783 coding upstream 424019 33661321 ~ 33787514 (+)
LOC118942063 NA coding upstream 682054 33528620 ~ 33530380 (+)
col21a1 LOC106589801 coding downstream 13962 34225871 ~ 34271548 (+)
bmp5 LOC106589803 coding downstream 61958 34273867 ~ 34312150 (+)
hmgcll1 LOC106589805 coding downstream 135245 34347154 ~ 34379366 (+)
LOC118942064 NA coding downstream 287122 34499031 ~ 34503666 (+)
klhl31 LOC106589810 coding downstream 357146 34569055 ~ 34573880 (+)
G1687581 NA non-coding upstream 190777 34020460 ~ 34020756 (+)
G1687545 bag2 non-coding upstream 241487 33967099 ~ 33970046 (+)
G1687496 NA non-coding upstream 315562 33895734 ~ 33895971 (+)
G1687463 NA non-coding upstream 342292 33868817 ~ 33869241 (+)
G1687456 NA non-coding upstream 348141 33863136 ~ 33863392 (+)
G1687628 NA non-coding downstream 474 34212383 ~ 34212610 (+)
G1687674 NA non-coding downstream 113458 34325367 ~ 34325584 (+)
G1687676 NA non-coding downstream 114427 34326336 ~ 34326687 (+)
G1687679 NA non-coding downstream 117033 34328942 ~ 34329146 (+)
G1687681 NA non-coding downstream 119910 34331819 ~ 34332148 (+)
LOC118942060 LOC106589768 other upstream 1026257 33177293 ~ 33196167 (+)
G1686317 LOC106589755 other upstream 1549885 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 4634975 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 4753612 29437357 ~ 29458499 (+)
G1681792 NA other upstream 5433124 28778006 ~ 28778409 (+)
G1687675 NA other downstream 113928 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 1169800 35381609 ~ 35384567 (+)
G1689347 NA other downstream 1469458 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 1489311 35701200 ~ 35702156 (+)
G1689671 NA other downstream 1669669 35881578 ~ 35881874 (+)

Expression


Co-expression Network