G1687628


Basic Information

Item Value
gene id G1687628
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 34212383 ~ 34212610 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1930327
tattggaaatgatgcagacaattacattgatagaagccacaatctatctgcaatattaaagctgatctacccacTAGAAAACGAACAAAACaatcattcttcttcttcttctctttcctgAGTGTAAGTTAACATGAgcattggtggaaaaagtatccaattgtcatacttgagtaaaagtaaagataccttaatagaaaatgactcaaagtGAATGCAACCCaggaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1930327 True 228 lncRNA 0.34 1 34212383 34212610

Neighbor

gene id symbol gene type direction distance location
zmp:0000000760 LOC106589800 coding upstream 3397 34184080 ~ 34208986 (+)
LOC110499368 LOC106589788 coding upstream 33452 33984466 ~ 34178931 (+)
rab23 LOC106589799 coding upstream 253655 33949752 ~ 33958728 (+)
LOC110499362 LOC106589783 coding upstream 424869 33661321 ~ 33787514 (+)
LOC118942063 NA coding upstream 682904 33528620 ~ 33530380 (+)
col21a1 LOC106589801 coding downstream 13261 34225871 ~ 34271548 (+)
bmp5 LOC106589803 coding downstream 61257 34273867 ~ 34312150 (+)
hmgcll1 LOC106589805 coding downstream 134544 34347154 ~ 34379366 (+)
LOC118942064 NA coding downstream 286421 34499031 ~ 34503666 (+)
klhl31 LOC106589810 coding downstream 356445 34569055 ~ 34573880 (+)
G1687627 NA non-coding upstream 474 34211533 ~ 34211909 (+)
G1687581 NA non-coding upstream 191627 34020460 ~ 34020756 (+)
G1687545 bag2 non-coding upstream 242337 33967099 ~ 33970046 (+)
G1687496 NA non-coding upstream 316412 33895734 ~ 33895971 (+)
G1687463 NA non-coding upstream 343142 33868817 ~ 33869241 (+)
G1687674 NA non-coding downstream 112757 34325367 ~ 34325584 (+)
G1687676 NA non-coding downstream 113726 34326336 ~ 34326687 (+)
G1687679 NA non-coding downstream 116332 34328942 ~ 34329146 (+)
G1687681 NA non-coding downstream 119209 34331819 ~ 34332148 (+)
LOC118942060 LOC106589768 other upstream 1027107 33177293 ~ 33196167 (+)
G1686317 LOC106589755 other upstream 1550735 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 4635825 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 4754462 29437357 ~ 29458499 (+)
G1681792 NA other upstream 5433974 28778006 ~ 28778409 (+)
G1687675 NA other downstream 113227 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 1169099 35381609 ~ 35384567 (+)
G1689347 NA other downstream 1468757 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 1488610 35701200 ~ 35702156 (+)
G1689671 NA other downstream 1668968 35881578 ~ 35881874 (+)

Expression


Co-expression Network