G1687674


Basic Information

Item Value
gene id G1687674
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 34325367 ~ 34325584 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1930379
gTCCGGCattgtttatatatatacagtggggcaaaaaagtatttaggcagccaccaattgtgcaagttctcccacttaaaaagatgagagaggcctgtaattttcatcataggtacacttcacctatgacagacaaaatgagggaaaaaaatccagaaaatcacattgtaggatttttaatacattcatttgcaaattatggtggaaaataagtattt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1930379 True 218 lncRNA 0.34 1 34325367 34325584

Neighbor

gene id symbol gene type direction distance location
bmp5 LOC106589803 coding upstream 13217 34273867 ~ 34312150 (+)
col21a1 LOC106589801 coding upstream 53819 34225871 ~ 34271548 (+)
zmp:0000000760 LOC106589800 coding upstream 116381 34184080 ~ 34208986 (+)
LOC110499368 LOC106589788 coding upstream 146436 33984466 ~ 34178931 (+)
rab23 LOC106589799 coding upstream 366639 33949752 ~ 33958728 (+)
hmgcll1 LOC106589805 coding downstream 21570 34347154 ~ 34379366 (+)
LOC118942064 NA coding downstream 173447 34499031 ~ 34503666 (+)
klhl31 LOC106589810 coding downstream 243471 34569055 ~ 34573880 (+)
gclc gsh1 coding downstream 257732 34583316 ~ 34591320 (+)
elovl5 LOC100192340 coding downstream 269373 34594957 ~ 34606103 (+)
G1687628 NA non-coding upstream 112757 34212383 ~ 34212610 (+)
G1687627 NA non-coding upstream 113458 34211533 ~ 34211909 (+)
G1687581 NA non-coding upstream 304611 34020460 ~ 34020756 (+)
G1687545 bag2 non-coding upstream 355321 33967099 ~ 33970046 (+)
G1687496 NA non-coding upstream 429396 33895734 ~ 33895971 (+)
G1687676 NA non-coding downstream 752 34326336 ~ 34326687 (+)
G1687679 NA non-coding downstream 3358 34328942 ~ 34329146 (+)
G1687681 NA non-coding downstream 6235 34331819 ~ 34332148 (+)
G1687730 NA non-coding downstream 85234 34410818 ~ 34411022 (+)
LOC118942060 LOC106589768 other upstream 1140091 33177293 ~ 33196167 (+)
G1686317 LOC106589755 other upstream 1663719 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 4748809 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 4867446 29437357 ~ 29458499 (+)
G1681792 NA other upstream 5546958 28778006 ~ 28778409 (+)
G1687675 NA other downstream 253 34325837 ~ 34326254 (+)
LOC110499396 LOC106589821 other downstream 1056125 35381609 ~ 35384567 (+)
G1689347 NA other downstream 1355783 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 1375636 35701200 ~ 35702156 (+)
G1689671 NA other downstream 1555994 35881578 ~ 35881874 (+)

Expression


Co-expression Network