G1687679


Basic Information

Item Value
gene id G1687679
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 34328942 ~ 34329146 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1930384
ctcaaaacttgagacatctgtggcattgtgttgtgtgacataaCTGTGTAATTTAGAGTgtgcttttattgtccccagcacaaggtgcacctgtgtaatgatcatgatgtttcatcagcttcttgatatgccatacctgccaggtggatggattattttagcagatgagaaatgctcacgaacagggctgtaaacacatttgaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1930384 True 205 lncRNA 0.41 1 34328942 34329146

Neighbor

gene id symbol gene type direction distance location
bmp5 LOC106589803 coding upstream 16792 34273867 ~ 34312150 (+)
col21a1 LOC106589801 coding upstream 57394 34225871 ~ 34271548 (+)
zmp:0000000760 LOC106589800 coding upstream 119956 34184080 ~ 34208986 (+)
LOC110499368 LOC106589788 coding upstream 150011 33984466 ~ 34178931 (+)
rab23 LOC106589799 coding upstream 370214 33949752 ~ 33958728 (+)
hmgcll1 LOC106589805 coding downstream 18008 34347154 ~ 34379366 (+)
LOC118942064 NA coding downstream 169885 34499031 ~ 34503666 (+)
klhl31 LOC106589810 coding downstream 239909 34569055 ~ 34573880 (+)
gclc gsh1 coding downstream 254170 34583316 ~ 34591320 (+)
elovl5 LOC100192340 coding downstream 265811 34594957 ~ 34606103 (+)
G1687676 NA non-coding upstream 2255 34326336 ~ 34326687 (+)
G1687674 NA non-coding upstream 3358 34325367 ~ 34325584 (+)
G1687628 NA non-coding upstream 116332 34212383 ~ 34212610 (+)
G1687627 NA non-coding upstream 117033 34211533 ~ 34211909 (+)
G1687581 NA non-coding upstream 308186 34020460 ~ 34020756 (+)
G1687681 NA non-coding downstream 2673 34331819 ~ 34332148 (+)
G1687730 NA non-coding downstream 81672 34410818 ~ 34411022 (+)
G1687731 NA non-coding downstream 82044 34411190 ~ 34411410 (+)
G1687732 NA non-coding downstream 82375 34411521 ~ 34411722 (+)
G1687675 NA other upstream 2688 34325837 ~ 34326254 (+)
LOC118942060 LOC106589768 other upstream 1143666 33177293 ~ 33196167 (+)
G1686317 LOC106589755 other upstream 1667294 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 4752384 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 4871021 29437357 ~ 29458499 (+)
LOC110499396 LOC106589821 other downstream 1052563 35381609 ~ 35384567 (+)
G1689347 NA other downstream 1352221 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 1372074 35701200 ~ 35702156 (+)
G1689671 NA other downstream 1552432 35881578 ~ 35881874 (+)
G1689732 LOC106612293 other downstream 1791470 36120616 ~ 36125390 (+)

Expression


Co-expression Network