G1687681


Basic Information

Item Value
gene id G1687681
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 34331819 ~ 34332148 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1930386
ccctgattgagtctgtaataccaacatgtttcaagcagaccaccatagtccctgtgcccaagaacacgaaggcaacctgTCAAAATGACTACAGAaaagtagcactcacgtccatagccatgaagtgctttgaaaggctggtaatggctcacatcaacaccattatcccagaaaccctagacccattccgatttgcataccgcccaaacagatccacagatgatgcaatctctactgcactccacactgccctttcccaactggacaagaggaacacttatgtgagaatgctattcattgactacagctcagcgttcaacaccgtaatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1930386 True 330 lncRNA 0.46 1 34331819 34332148

Neighbor

gene id symbol gene type direction distance location
bmp5 LOC106589803 coding upstream 19669 34273867 ~ 34312150 (+)
col21a1 LOC106589801 coding upstream 60271 34225871 ~ 34271548 (+)
zmp:0000000760 LOC106589800 coding upstream 122833 34184080 ~ 34208986 (+)
LOC110499368 LOC106589788 coding upstream 152888 33984466 ~ 34178931 (+)
rab23 LOC106589799 coding upstream 373091 33949752 ~ 33958728 (+)
hmgcll1 LOC106589805 coding downstream 15006 34347154 ~ 34379366 (+)
LOC118942064 NA coding downstream 166883 34499031 ~ 34503666 (+)
klhl31 LOC106589810 coding downstream 236907 34569055 ~ 34573880 (+)
gclc gsh1 coding downstream 251168 34583316 ~ 34591320 (+)
elovl5 LOC100192340 coding downstream 262809 34594957 ~ 34606103 (+)
G1687679 NA non-coding upstream 2673 34328942 ~ 34329146 (+)
G1687676 NA non-coding upstream 5132 34326336 ~ 34326687 (+)
G1687674 NA non-coding upstream 6235 34325367 ~ 34325584 (+)
G1687628 NA non-coding upstream 119209 34212383 ~ 34212610 (+)
G1687627 NA non-coding upstream 119910 34211533 ~ 34211909 (+)
G1687730 NA non-coding downstream 78670 34410818 ~ 34411022 (+)
G1687731 NA non-coding downstream 79042 34411190 ~ 34411410 (+)
G1687732 NA non-coding downstream 79373 34411521 ~ 34411722 (+)
G1687735 NA non-coding downstream 82615 34414763 ~ 34419287 (+)
G1687675 NA other upstream 5565 34325837 ~ 34326254 (+)
LOC118942060 LOC106589768 other upstream 1146543 33177293 ~ 33196167 (+)
G1686317 LOC106589755 other upstream 1670171 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 4755261 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 4873898 29437357 ~ 29458499 (+)
LOC110499396 LOC106589821 other downstream 1049561 35381609 ~ 35384567 (+)
G1689347 NA other downstream 1349219 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 1369072 35701200 ~ 35702156 (+)
G1689671 NA other downstream 1549430 35881578 ~ 35881874 (+)
G1689732 LOC106612293 other downstream 1788468 36120616 ~ 36125390 (+)

Expression


Co-expression Network