Gene
RNA
| Item | Value |
|---|---|
| gene id | G1687732 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 34411521 ~ 34411722 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1930439 | True | 202 | lncRNA | 0.37 | 1 | 34411521 | 34411722 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| hmgcll1 | LOC106589805 | coding | upstream | 32155 | 34347154 ~ 34379366 (+) |
| bmp5 | LOC106589803 | coding | upstream | 99371 | 34273867 ~ 34312150 (+) |
| col21a1 | LOC106589801 | coding | upstream | 139973 | 34225871 ~ 34271548 (+) |
| zmp:0000000760 | LOC106589800 | coding | upstream | 202535 | 34184080 ~ 34208986 (+) |
| LOC110499368 | LOC106589788 | coding | upstream | 232590 | 33984466 ~ 34178931 (+) |
| LOC118942064 | NA | coding | downstream | 87309 | 34499031 ~ 34503666 (+) |
| klhl31 | LOC106589810 | coding | downstream | 157333 | 34569055 ~ 34573880 (+) |
| gclc | gsh1 | coding | downstream | 171594 | 34583316 ~ 34591320 (+) |
| elovl5 | LOC100192340 | coding | downstream | 183235 | 34594957 ~ 34606103 (+) |
| LOC110499384 | LOC106589811 | coding | downstream | 203978 | 34615700 ~ 34626578 (+) |
| G1687731 | NA | non-coding | upstream | 111 | 34411190 ~ 34411410 (+) |
| G1687730 | NA | non-coding | upstream | 499 | 34410818 ~ 34411022 (+) |
| G1687681 | NA | non-coding | upstream | 79373 | 34331819 ~ 34332148 (+) |
| G1687679 | NA | non-coding | upstream | 82375 | 34328942 ~ 34329146 (+) |
| G1687735 | NA | non-coding | downstream | 3041 | 34414763 ~ 34419287 (+) |
| G1687845 | NA | non-coding | downstream | 214996 | 34626718 ~ 34683245 (+) |
| LOC110499597 | NA | non-coding | downstream | 272971 | 34684614 ~ 34685478 (+) |
| G1688405 | NA | non-coding | downstream | 331109 | 34742831 ~ 34743036 (+) |
| G1688410 | NA | non-coding | downstream | 335135 | 34746857 ~ 34747323 (+) |
| G1687675 | NA | other | upstream | 85267 | 34325837 ~ 34326254 (+) |
| LOC118942060 | LOC106589768 | other | upstream | 1226245 | 33177293 ~ 33196167 (+) |
| G1686317 | LOC106589755 | other | upstream | 1749873 | 32654354 ~ 32661648 (+) |
| LOC110499316 | LOC106589729 | other | upstream | 4834963 | 29572397 ~ 29588171 (+) |
| lhcgr | lhr | other | upstream | 4953600 | 29437357 ~ 29458499 (+) |
| LOC110499396 | LOC106589821 | other | downstream | 969987 | 35381609 ~ 35384567 (+) |
| G1689347 | NA | other | downstream | 1269645 | 35681367 ~ 35682437 (+) |
| LOC118942012 | LOC106589797 | other | downstream | 1289498 | 35701200 ~ 35702156 (+) |
| G1689671 | NA | other | downstream | 1469856 | 35881578 ~ 35881874 (+) |
| G1689732 | LOC106612293 | other | downstream | 1708894 | 36120616 ~ 36125390 (+) |
