G1688410


Basic Information

Item Value
gene id G1688410
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 34746857 ~ 34747323 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1931214
cctataatgtgttttgtctatgtgtcacgttctgaccttagttcttttgttatgtctttgttttagtatggtcagggcgtgagttgggtgggttgtctatgttagtttttctatgattttctatttctgtgtttggcctggtatggttctcaatcagaggcagctgtcaatcgttgtccctgattgagaaccatatttaggtagcctgttttctattgtgtttcgtgggtgattgtttcctgtgtctgtgtttggaccacacgggactgtttcgattttcgttTGTTCATTTcacgttgttgttttgtatttttgtagtgttcagtatcattattaaaatggacacttaccacgctgcgcattggtcctcctcttctccttcatacgacgaccgtgacactatgtgtatcttttatcataattttagctttttagtaaataaatattcaactaagattggtgtggta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1931214 True 467 lncRNA 0.38 1 34746857 34747323

Neighbor

gene id symbol gene type direction distance location
LOC110499597 NA coding upstream 61379 34684614 ~ 34685478 (+)
LOC110499390 LOC106589817 coding upstream 75427 34656043 ~ 34671430 (+)
LOC110499387 gsta3 coding upstream 116595 34627219 ~ 34630262 (+)
LOC110499384 LOC106589811 coding upstream 120279 34615700 ~ 34626578 (+)
elovl5 LOC100192340 coding upstream 140754 34594957 ~ 34606103 (+)
LOC110499391 LOC106589815 coding downstream 19446 34766769 ~ 35179392 (+)
LOC110499393 LOC106589819 coding downstream 565288 35312611 ~ 35323282 (+)
LOC110499394 LOC106589820 coding downstream 591126 35338449 ~ 35374027 (+)
LOC110499396 LOC106589821 coding downstream 634286 35381609 ~ 35384567 (+)
LOC110499398 m4a15 coding downstream 662916 35410239 ~ 35417932 (+)
G1688405 NA non-coding upstream 3821 34742831 ~ 34743036 (+)
G1687845 NA non-coding upstream 63612 34626718 ~ 34683245 (+)
G1687735 NA non-coding upstream 327570 34414763 ~ 34419287 (+)
G1687732 NA non-coding upstream 335135 34411521 ~ 34411722 (+)
G1688414 NA non-coding downstream 2681 34750004 ~ 34750436 (+)
G1688418 NA non-coding downstream 5119 34752442 ~ 34752902 (+)
G1688533 NA non-coding downstream 131883 34879206 ~ 34881587 (+)
G1688674 NA non-coding downstream 332580 35079903 ~ 35080125 (+)
G1688728 NA non-coding downstream 426435 35173758 ~ 35173985 (+)
G1687675 NA other upstream 420603 34325837 ~ 34326254 (+)
LOC118942060 LOC106589768 other upstream 1561581 33177293 ~ 33196167 (+)
G1686317 LOC106589755 other upstream 2085209 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 5170299 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 5288936 29437357 ~ 29458499 (+)
G1689347 NA other downstream 934044 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 953897 35701200 ~ 35702156 (+)
G1689671 NA other downstream 1134255 35881578 ~ 35881874 (+)
G1689732 LOC106612293 other downstream 1373293 36120616 ~ 36125390 (+)

Expression


Co-expression Network