Item | Value |
---|---|
gene id | G1688728 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048584.1 |
NCBI id | CM023238.2 |
chromosome length | 46616863 |
location | 35173758 ~ 35173985 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1931547 | True | 228 | lncRNA | 0.38 | 1 | 35173758 | 35173985 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110499597 | NA | coding | upstream | 488280 | 34684614 ~ 34685478 (+) |
LOC110499390 | LOC106589817 | coding | upstream | 502328 | 34656043 ~ 34671430 (+) |
LOC110499387 | gsta3 | coding | upstream | 543496 | 34627219 ~ 34630262 (+) |
LOC110499384 | LOC106589811 | coding | upstream | 547180 | 34615700 ~ 34626578 (+) |
elovl5 | LOC100192340 | coding | upstream | 567655 | 34594957 ~ 34606103 (+) |
LOC110499393 | LOC106589819 | coding | downstream | 138626 | 35312611 ~ 35323282 (+) |
LOC110499394 | LOC106589820 | coding | downstream | 164464 | 35338449 ~ 35374027 (+) |
LOC110499396 | LOC106589821 | coding | downstream | 207624 | 35381609 ~ 35384567 (+) |
LOC110499398 | m4a15 | coding | downstream | 236254 | 35410239 ~ 35417932 (+) |
LOC110499400 | LOC100194728 | coding | downstream | 264995 | 35438980 ~ 35446541 (+) |
G1688674 | NA | non-coding | upstream | 93633 | 35079903 ~ 35080125 (+) |
G1688533 | NA | non-coding | upstream | 292171 | 34879206 ~ 34881587 (+) |
G1688418 | NA | non-coding | upstream | 420856 | 34752442 ~ 34752902 (+) |
G1688414 | NA | non-coding | upstream | 423322 | 34750004 ~ 34750436 (+) |
G1688410 | NA | non-coding | upstream | 426435 | 34746857 ~ 34747323 (+) |
G1688729 | NA | non-coding | downstream | 1722 | 35175707 ~ 35176286 (+) |
G1689018 | NA | non-coding | downstream | 12034 | 35186019 ~ 35191028 (+) |
G1689092 | NA | non-coding | downstream | 59216 | 35233201 ~ 35233536 (+) |
G1689100 | NA | non-coding | downstream | 63603 | 35237588 ~ 35237856 (+) |
G1689110 | NA | non-coding | downstream | 72287 | 35246272 ~ 35246531 (+) |
G1687675 | NA | other | upstream | 847504 | 34325837 ~ 34326254 (+) |
LOC118942060 | LOC106589768 | other | upstream | 1988482 | 33177293 ~ 33196167 (+) |
G1686317 | LOC106589755 | other | upstream | 2512110 | 32654354 ~ 32661648 (+) |
LOC110499316 | LOC106589729 | other | upstream | 5597200 | 29572397 ~ 29588171 (+) |
lhcgr | lhr | other | upstream | 5715837 | 29437357 ~ 29458499 (+) |
G1689347 | NA | other | downstream | 507382 | 35681367 ~ 35682437 (+) |
LOC118942012 | LOC106589797 | other | downstream | 527235 | 35701200 ~ 35702156 (+) |
G1689671 | NA | other | downstream | 707593 | 35881578 ~ 35881874 (+) |
G1689732 | LOC106612293 | other | downstream | 946631 | 36120616 ~ 36125390 (+) |