Gene
RNA
| Item | Value |
|---|---|
| gene id | G1689110 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 35246272 ~ 35246531 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC109204916 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1931950 | True | 226 | lncRNA | 0.36 | 2 | 35246272 | 35246531 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499391 | LOC106589815 | coding | upstream | 66880 | 34766769 ~ 35179392 (+) |
| LOC110499597 | NA | coding | upstream | 560794 | 34684614 ~ 34685478 (+) |
| LOC110499390 | LOC106589817 | coding | upstream | 574842 | 34656043 ~ 34671430 (+) |
| LOC110499387 | gsta3 | coding | upstream | 616010 | 34627219 ~ 34630262 (+) |
| LOC110499384 | LOC106589811 | coding | upstream | 619694 | 34615700 ~ 34626578 (+) |
| LOC110499393 | LOC106589819 | coding | downstream | 66080 | 35312611 ~ 35323282 (+) |
| LOC110499394 | LOC106589820 | coding | downstream | 91918 | 35338449 ~ 35374027 (+) |
| LOC110499396 | LOC106589821 | coding | downstream | 135078 | 35381609 ~ 35384567 (+) |
| LOC110499398 | m4a15 | coding | downstream | 163708 | 35410239 ~ 35417932 (+) |
| LOC110499400 | LOC100194728 | coding | downstream | 192449 | 35438980 ~ 35446541 (+) |
| G1689100 | NA | non-coding | upstream | 8416 | 35237588 ~ 35237856 (+) |
| G1689092 | NA | non-coding | upstream | 12736 | 35233201 ~ 35233536 (+) |
| G1689018 | NA | non-coding | upstream | 55244 | 35186019 ~ 35191028 (+) |
| G1688729 | NA | non-coding | upstream | 69986 | 35175707 ~ 35176286 (+) |
| G1688728 | NA | non-coding | upstream | 72287 | 35173758 ~ 35173985 (+) |
| G1689115 | NA | non-coding | downstream | 2377 | 35248908 ~ 35249142 (+) |
| G1689124 | NA | non-coding | downstream | 8468 | 35254999 ~ 35255248 (+) |
| G1689132 | NA | non-coding | downstream | 14183 | 35260714 ~ 35260941 (+) |
| G1689152 | NA | non-coding | downstream | 25715 | 35272246 ~ 35272489 (+) |
| G1689183 | NA | non-coding | downstream | 60651 | 35307182 ~ 35308934 (+) |
| G1687675 | NA | other | upstream | 920018 | 34325837 ~ 34326254 (+) |
| LOC118942060 | LOC106589768 | other | upstream | 2060996 | 33177293 ~ 33196167 (+) |
| G1686317 | LOC106589755 | other | upstream | 2584624 | 32654354 ~ 32661648 (+) |
| LOC110499316 | LOC106589729 | other | upstream | 5669714 | 29572397 ~ 29588171 (+) |
| lhcgr | lhr | other | upstream | 5788351 | 29437357 ~ 29458499 (+) |
| G1689347 | NA | other | downstream | 434836 | 35681367 ~ 35682437 (+) |
| LOC118942012 | LOC106589797 | other | downstream | 454689 | 35701200 ~ 35702156 (+) |
| G1689671 | NA | other | downstream | 635047 | 35881578 ~ 35881874 (+) |
| G1689732 | LOC106612293 | other | downstream | 874085 | 36120616 ~ 36125390 (+) |
