G1689124


Basic Information

Item Value
gene id G1689124
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 35254999 ~ 35255248 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1931964
ATCAAAATGAATTGgtcacagatttgcagatgttattgcaagtgcagcaaaatgcttgtgtttctaactccaacagtgtagtaatacgCACATAATCCaaaaaagctatgatcccttactgatgtcacttgttaaatcctcttcaatcagtgtagatgaaggggaagagacaggttaaagaattaTTTTTACTTattgagacaattaagacataGATTAtgtatgtttgccattcagagggtgaatgggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1931964 True 250 lncRNA 0.36 1 35254999 35255248

Neighbor

gene id symbol gene type direction distance location
LOC110499391 LOC106589815 coding upstream 75607 34766769 ~ 35179392 (+)
LOC110499597 NA coding upstream 569521 34684614 ~ 34685478 (+)
LOC110499390 LOC106589817 coding upstream 583569 34656043 ~ 34671430 (+)
LOC110499387 gsta3 coding upstream 624737 34627219 ~ 34630262 (+)
LOC110499384 LOC106589811 coding upstream 628421 34615700 ~ 34626578 (+)
LOC110499393 LOC106589819 coding downstream 57363 35312611 ~ 35323282 (+)
LOC110499394 LOC106589820 coding downstream 83201 35338449 ~ 35374027 (+)
LOC110499396 LOC106589821 coding downstream 126361 35381609 ~ 35384567 (+)
LOC110499398 m4a15 coding downstream 154991 35410239 ~ 35417932 (+)
LOC110499400 LOC100194728 coding downstream 183732 35438980 ~ 35446541 (+)
G1689115 NA non-coding upstream 5857 35248908 ~ 35249142 (+)
G1689110 NA non-coding upstream 8468 35246272 ~ 35246531 (+)
G1689100 NA non-coding upstream 17143 35237588 ~ 35237856 (+)
G1689092 NA non-coding upstream 21463 35233201 ~ 35233536 (+)
G1689018 NA non-coding upstream 63971 35186019 ~ 35191028 (+)
G1689132 NA non-coding downstream 5466 35260714 ~ 35260941 (+)
G1689152 NA non-coding downstream 16998 35272246 ~ 35272489 (+)
G1689183 NA non-coding downstream 51934 35307182 ~ 35308934 (+)
G1689192 NA non-coding downstream 75366 35330614 ~ 35330888 (+)
G1689174 NA non-coding downstream 120352 35375600 ~ 35378074 (+)
G1687675 NA other upstream 928745 34325837 ~ 34326254 (+)
LOC118942060 LOC106589768 other upstream 2069723 33177293 ~ 33196167 (+)
G1686317 LOC106589755 other upstream 2593351 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 5678441 29572397 ~ 29588171 (+)
lhcgr lhr other upstream 5797078 29437357 ~ 29458499 (+)
G1689347 NA other downstream 426119 35681367 ~ 35682437 (+)
LOC118942012 LOC106589797 other downstream 445972 35701200 ~ 35702156 (+)
G1689671 NA other downstream 626330 35881578 ~ 35881874 (+)
G1689732 LOC106612293 other downstream 865368 36120616 ~ 36125390 (+)

Expression


Co-expression Network