G1689416


Basic Information

Item Value
gene id G1689416
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 35381700 ~ 35382983 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1932291
aaataaaaaagggtTAATTTGGGGGCAAAACAATAAGCTTAATTTGTTCTGAGATCAAATTAATTattaacaaaataatgttgcaggtaTGCTAATCTTAGcagtttctaactacagaaatgatttcagaacaatctgtgatagcgggtgtcatggcttgctgaaatgaaaTAGAATGACGCTGGAGTTCTTCAACAAGAGTGACTATCAATCCCTGGCAGAAACGTGTCCCTAATGTTAGGCTATGGCTAGACATCAGCCATTGCTTAGCTATGTTTCAGTATCATGTCTCACCAAAGGTCATTCTGCCACTGATAATCTCAGGGCTTTTCTTCATGTCACTGATGGCAGCAATGGGCAGACCCCAGTTGGCCACAGGTCCCCAGAAGTGCTGGCTCATCAAATAGTCTCTGAACTCCTTGCTTTTAAGGTGGTCAACAGCTTTACGTGCCAAAGTACCTGCCATGACTTCGGATTGTGGTGGTTCGCAGAGGAAATTATAACTATGGGAATGTATAAACTGGGTAAATGCAGTTAAGCGTAGAGGACACCAGTGGTCACAGAGCTTCACCAAAACATAATTTTTACGACACAGT

Function

NR:

description
Brain protein 44-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1932291 True 596 lncRNA 0.41 2 35381700 35382983

Neighbor

gene id symbol gene type direction distance location
LOC110499392 LOC106589818 coding downstream 71511 35273214 ~ 35310189 (-)
LOC110499538 LOC106589816 coding downstream 698279 34649274 ~ 34683421 (-)
LOC110499389 LOC106589814 coding downstream 732736 34636155 ~ 34648964 (-)
LOC110499388 LOC106589793 coding downstream 747568 34631922 ~ 34634132 (-)
fbxo9 LOC106589812 coding downstream 768883 34607155 ~ 34612817 (-)
LOC110499397 LOC106589822 coding upstream 4866 35387849 ~ 35405611 (-)
LOC110499399 LOC106589794 coding upstream 46142 35429125 ~ 35432450 (-)
LOC110499402 LOC106589795 coding upstream 63828 35446811 ~ 35459745 (-)
LOC110499408 LOC106589827 coding upstream 178267 35561250 ~ 35567621 (-)
LOC110499415 LOC106589833 coding upstream 436046 35819029 ~ 35826024 (-)
G1689429 NA non-coding downstream 6323 35374682 ~ 35375377 (-)
G1689420 NA non-coding downstream 17627 35363230 ~ 35364073 (-)
G1689394 NA non-coding downstream 44125 35337361 ~ 35337575 (-)
G1689392 NA non-coding downstream 46056 35335428 ~ 35335644 (-)
G1689389 NA non-coding downstream 48802 35332557 ~ 35332898 (-)
G1689415 NA non-coding upstream 2052 35385035 ~ 35387275 (-)
G1689439 NA non-coding upstream 25387 35408370 ~ 35408711 (-)
G1689442 NA non-coding upstream 42124 35425107 ~ 35425338 (-)
G1689443 NA non-coding upstream 43233 35426216 ~ 35426439 (-)
G1689414 NA non-coding upstream 56263 35439246 ~ 35441644 (-)
G1689131 NA other downstream 121492 35259886 ~ 35260208 (-)
G1689130 NA other downstream 121882 35258989 ~ 35259818 (-)
G1687007 LOC106589782 other downstream 1837462 33531084 ~ 33544238 (-)
LOC110499358 LOC106589782 other downstream 1847424 33530945 ~ 33535225 (-)
G1686887 NA other downstream 2303673 33077810 ~ 33078027 (-)
G1689461 NA other upstream 95131 35478114 ~ 35480057 (-)
G1689556 NA other upstream 260385 35643368 ~ 35643777 (-)
LOC110499416 dnah17 other upstream 482717 35864651 ~ 35951415 (-)
LOC110499427 LOC106612293 other upstream 737524 36120507 ~ 36125437 (-)
G1690367 NA other upstream 1036733 36418789 ~ 36420600 (-)

Expression


Co-expression Network