G1689473


Basic Information

Item Value
gene id G1689473
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 35491915 ~ 35493696 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1932352
GCATTTAGAATTAAATGTGGGATGGCACTTTAGAGTTACGCGCGATGAGGTCACGGGCCCCGGGTACCTTCAAAATGATTTGTTGCAATAAAGAAATGTCATgtcaagtgtgtgtatgtgcgcaacGCTCACCTTCCCAGAGACAGATTCTCCATCATAAAAAAGGTAGTTCTTTTCCACTTTTCCATCCTCTGTTTTGAGTTCTGCAGTCTTCCTAGTCTCTGCATCATTGAGTAGGACATCAATTTCACACACAGGACCAAATAAACCACCCAGGAAACTCTTTCATCTGTTTAAACTGCTGTGACAGCTAGCTAGCCTCCGTGTTGCTAATTCCTGTGTCGATACACAAAACAGAGAAGCAGTATATCTGTGAATACAGAAGCAATGGCAACACATacctttcaaaataaaagtccaacGTCTAGCGATGTAATTTTTTTAGTCCACTGCTGCTGCAAATTTTCACATTCACTGTTTGCAGATGATTGAGTACTTTTCTGAAGGTTTTGGCAAAATCTCTATTGTCTACAGTAACTTTCTTTAGAAGAGGCAGTTTATCGGTAATATATTTTGACTTTGATATAGCAGCACGTTGTGTATCAAGACAGCGTTACTTGGGGTGCATTTATGTGCctgagcgcagaataactgatgaatttactaaCCCACAACAATATTTTAATatgaccagtgtcagtaaacTTCGGCAACAAAAcgcaattaaattgttgccagcagcacagttagtcaccaacagTGGCGATTTTAAGCATGTAAATCTCagtgccagcaaagccactacgcaatacaacactaaacaatacattaattgcacaaTAACGTTGACAAACGGTGtccacaaactgttaggaccaatataaagctgtcccaacagcagagctttcttttcagtaTGATGGAGTGAAACCTTACccccgctacacctggctatcagcagagacttgtctggcagcaaaacggTTAATTCAGCCTTATTTACTGCCTTCTTTAAAAAATAGCTGATATTGCTGAATTGCTTAAACT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1932352 True 1047 lncRNA 0.40 3 35491915 35493696

Neighbor

gene id symbol gene type direction distance location
LOC110499402 LOC106589795 coding downstream 32170 35446811 ~ 35459745 (-)
LOC110499399 LOC106589794 coding downstream 59465 35429125 ~ 35432450 (-)
LOC110499397 LOC106589822 coding downstream 86304 35387849 ~ 35405611 (-)
LOC110499392 LOC106589818 coding downstream 181726 35273214 ~ 35310189 (-)
LOC110499538 LOC106589816 coding downstream 808494 34649274 ~ 34683421 (-)
LOC110499408 LOC106589827 coding upstream 67554 35561250 ~ 35567621 (-)
LOC110499415 LOC106589833 coding upstream 325333 35819029 ~ 35826024 (-)
LOC110499416 dnah17 coding upstream 370955 35864651 ~ 35951415 (-)
LOC110499419 LOC106589836 coding upstream 457877 35951573 ~ 35985223 (-)
LOC110499420 NA coding upstream 492815 35986511 ~ 35993622 (-)
G1689414 NA non-coding downstream 50271 35439246 ~ 35441644 (-)
G1689443 NA non-coding downstream 65476 35426216 ~ 35426439 (-)
G1689442 NA non-coding downstream 66577 35425107 ~ 35425338 (-)
G1689439 NA non-coding downstream 83204 35408370 ~ 35408711 (-)
G1689415 NA non-coding downstream 104640 35385035 ~ 35387275 (-)
G1689511 NA non-coding upstream 69904 35563600 ~ 35563891 (-)
G1689546 NA non-coding upstream 113867 35607563 ~ 35608098 (-)
G1689536 rufy2 non-coding upstream 141100 35634796 ~ 35636597 (-)
G1689557 NA non-coding upstream 151026 35644722 ~ 35646487 (-)
G1689558 NA non-coding upstream 153330 35647026 ~ 35647464 (-)
G1689461 NA other downstream 11858 35478114 ~ 35480057 (-)
G1689131 NA other downstream 231707 35259886 ~ 35260208 (-)
G1689130 NA other downstream 232097 35258989 ~ 35259818 (-)
G1687007 LOC106589782 other downstream 1947677 33531084 ~ 33544238 (-)
LOC110499358 LOC106589782 other downstream 1957639 33530945 ~ 33535225 (-)
G1689556 NA other upstream 149672 35643368 ~ 35643777 (-)
LOC110499427 LOC106612293 other upstream 626811 36120507 ~ 36125437 (-)
G1690367 NA other upstream 926020 36418789 ~ 36420600 (-)
G1690649 NA other upstream 1208850 36702546 ~ 36703441 (-)

Expression


Co-expression Network