G1689546


Basic Information

Item Value
gene id G1689546
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 35607563 ~ 35608098 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1932436
AATGCTCAAAAGTATTACAGTGAGCTCACACACAAAAAATTAAACAGCATAAAAAAAGACAACTTTATAACCTCCACCACAACCGAACAGTAAGAAGATTTCAAAGCaagatctaaaaaaaaaaaaatctgatggcACCTTAAAAGTTTGTCACAAATACATAATCAATAGTTTTGACTGACATTAATTTGATGTCATTAGAGTCGAAAATGAGTTTGAAAATAAGTTGACCATTTGTTTAACTTCCCATTTGGTGTGGATGGATTCAAATATGAAGTCATTCATCGTTCTGTCTCAGGAGAACCACCTCATTTAGTCCTTTTCCATAGAAACAGGCTGCGGATTGCACTTGTGGTCTGGATAAGTATGTAACAGTTAGCCTTTAAAACTAGGCATGCAATCCCATACGACCATGCTTttaacagacatacagtaccagtcaaaagtttggacacacctactcattgagggttttgtgaagacatcaaaaaaaactatgaaataacacatatggaatcatgtagtaaccaaaaggt

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1932436 True 536 lncRNA 0.35 1 35607563 35608098

Neighbor

gene id symbol gene type direction distance location
LOC110499408 LOC106589827 coding downstream 39942 35561250 ~ 35567621 (-)
LOC110499402 LOC106589795 coding downstream 147818 35446811 ~ 35459745 (-)
LOC110499399 LOC106589794 coding downstream 175113 35429125 ~ 35432450 (-)
LOC110499397 LOC106589822 coding downstream 201952 35387849 ~ 35405611 (-)
LOC110499392 LOC106589818 coding downstream 297374 35273214 ~ 35310189 (-)
LOC110499415 LOC106589833 coding upstream 210931 35819029 ~ 35826024 (-)
LOC110499416 dnah17 coding upstream 256553 35864651 ~ 35951415 (-)
LOC110499419 LOC106589836 coding upstream 343475 35951573 ~ 35985223 (-)
LOC110499420 NA coding upstream 378413 35986511 ~ 35993622 (-)
LOC110499423 NA coding upstream 423333 36031153 ~ 36037747 (-)
G1689511 NA non-coding downstream 43672 35563600 ~ 35563891 (-)
G1689473 NA non-coding downstream 113867 35491915 ~ 35493696 (-)
G1689414 NA non-coding downstream 165919 35439246 ~ 35441644 (-)
G1689443 NA non-coding downstream 181124 35426216 ~ 35426439 (-)
G1689442 NA non-coding downstream 182225 35425107 ~ 35425338 (-)
G1689536 rufy2 non-coding upstream 26698 35634796 ~ 35636597 (-)
G1689557 NA non-coding upstream 36624 35644722 ~ 35646487 (-)
G1689558 NA non-coding upstream 38928 35647026 ~ 35647464 (-)
G1689560 NA non-coding upstream 41476 35649574 ~ 35650370 (-)
G1689562 NA non-coding upstream 43606 35651704 ~ 35652376 (-)
G1689461 NA other downstream 127506 35478114 ~ 35480057 (-)
G1689131 NA other downstream 347355 35259886 ~ 35260208 (-)
G1689130 NA other downstream 347745 35258989 ~ 35259818 (-)
G1687007 LOC106589782 other downstream 2063325 33531084 ~ 33544238 (-)
LOC110499358 LOC106589782 other downstream 2073287 33530945 ~ 33535225 (-)
G1689556 NA other upstream 35270 35643368 ~ 35643777 (-)
LOC110499427 LOC106612293 other upstream 512409 36120507 ~ 36125437 (-)
G1690367 NA other upstream 811618 36418789 ~ 36420600 (-)
G1690649 NA other upstream 1094448 36702546 ~ 36703441 (-)

Expression


Co-expression Network