G1689300


Basic Information

Item Value
gene id G1689300
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 35645703 ~ 35646183 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1932165
TGAAAGACTGATCAATAACTGcaggaagcgtttggttggagtcattgccgctaaaggtggcacaaccagttagtGAGTGTAAGGGGGCATTCACACGGGGGCATTGGGTGATGCATAActttgttatttgtaaactcaggttccctttatctaatattaggttttggttgaagatctgataacattcaatataaaaaatatgcaaaaatagagaatCTGAGAGGGGGAAATTACTTTTTCATGGTACTGTATGATATGGTCATTAGAGTGGACTCTGCTTGTAAATTCAAGGTAGATTTTCCATGAAAATATTACACAATACACACTGCACCATTCTACGACATCAATCACTTGAATAGAGCCTGCCACACACGCATCTTGTCTGATTTGTGAAAACAGCTCTTGCAAATGTGTGGGGAAAATACTTTAaggcagagagaggtagggagggctACGTGATCTCTAAACATGTACAGTTTTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1932165 True 481 lncRNA 0.39 1 35645703 35646183

Neighbor

gene id symbol gene type direction distance location
LOC110499411 rufy2 coding upstream 4535 35622634 ~ 35641168 (+)
LOC110499410 LOC106589828 coding upstream 40463 35571254 ~ 35605240 (+)
LOC110499407 LOC106589825 coding upstream 86944 35536932 ~ 35558759 (+)
LOC110499539 LOC105890937 coding upstream 123406 35511227 ~ 35522297 (+)
LOC110499406 LOC106589826 coding upstream 137044 35500779 ~ 35508659 (+)
LOC110499412 LOC106589830 coding downstream 5484 35651667 ~ 35662421 (+)
LOC110499413 LOC106589831 coding downstream 16325 35662508 ~ 35672943 (+)
LOC110499414 pbld2 coding downstream 29599 35675782 ~ 35679430 (+)
LOC118942012 LOC106589797 coding downstream 55017 35701200 ~ 35702156 (+)
LOC110499417 LOC106589835 coding downstream 191140 35837323 ~ 35866849 (+)
G1689295 NA non-coding upstream 115 35645262 ~ 35645588 (+)
G1689299 NA non-coding upstream 523 35644804 ~ 35645180 (+)
G1689342 NA non-coding upstream 1871 35642917 ~ 35643832 (+)
G1689337 NA non-coding upstream 28037 35617450 ~ 35617666 (+)
G1689303 NA non-coding upstream 94502 35550645 ~ 35551201 (+)
G1689294 NA non-coding downstream 884 35647067 ~ 35649366 (+)
G1689357 NA non-coding downstream 53066 35699249 ~ 35699456 (+)
G1689345 NA non-coding downstream 56030 35702213 ~ 35705279 (+)
G1689587 NA non-coding downstream 60470 35706653 ~ 35707228 (+)
G1689592 NA non-coding downstream 63431 35709614 ~ 35709832 (+)
LOC110499396 LOC106589821 other upstream 261137 35381609 ~ 35384567 (+)
G1687675 NA other upstream 1319449 34325837 ~ 34326254 (+)
LOC118942060 LOC106589768 other upstream 2460427 33177293 ~ 33196167 (+)
G1686317 LOC106589755 other upstream 2984055 32654354 ~ 32661648 (+)
LOC110499316 LOC106589729 other upstream 6069145 29572397 ~ 29588171 (+)
G1689347 NA other downstream 35184 35681367 ~ 35682437 (+)
G1689671 NA other downstream 235395 35881578 ~ 35881874 (+)
G1689732 LOC106612293 other downstream 474433 36120616 ~ 36125390 (+)
G1690092 NA other downstream 618477 36264660 ~ 36264981 (+)

Expression


Co-expression Network