G1689568


Basic Information

Item Value
gene id G1689568
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 35660866 ~ 35662428 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1932462
TAGAAGTGTCAACCTATATttattaataaaatataaaaaatgattaTTTAAACATTAATGATTCATATTTGTTCATATTTAAGTGACATTTGAATTACATTTGGGTTTTAAACATGTTCCAAGGTCAAATAAATGCCCCCAATACAATACAgtgtttaaaaaatacatataggCTTATAGAGAGAACTATTATAGGTGCCGAAGTAAATAATATAGTGTTATTTCATGGGGGAGTGAGGTCTAAATGACCTGCAATACTTTCTACTCCACCCACTCTATTCACGGCAATGCAGGCCTATAGGTGACTTATTCTtatcaggttaggagaattaggggACACGTCCCCAACCTAGATCAcgaccatagagaatgatagaaaCCTCTAGTGGAAAAAATGCTATTTTAgtatgggcagcaccattgaggaataccaccattttaatgtagtcaatAGGGAGAGGGTTTCCtaaggttagggaaagggttagggttagctaaaatgcaaaaaaaataaactttTGATGTCAATTTGACCAAAGCTGTATCCCGTCTAGACATTACCCTGTGCGGTGGGCTGTAAAACGTATACGGGTTGCGTTCCTGCCCGACTACATTGCAGATACCTTGACGGCCCTGAAagacttgaagtagttgttccccttgcagaGTTTTTTTGGAGCGATGGATAACAGTgcctgttgtcgatgtgtgcagagggtccctggtacgagcccaggtaggggcgaggagagggacggaagctatactgttacacatacacCGGGAATCTTTGCCCagtttatttttttgcattttagctagccatttcacaacgGTTACATATGTGATGCGTCGCATCAAACGACGAGCGACGCAGACAGGGTAGCGAGAGTGGGGAAACAGAAAAGTCATTGTCTGTTATTTTAAGTTTTGAAGTTGAGTCTTTGCCTGACAAAGTGTAGTTAGGATATAGAAGTTATCCTGTACGAGCGTATGTGCCGAATATATTAAGATGTTATAGGTGTCAAgtttatgggcatgtggcagcaatGTGTAGGAGGGAGGGTCCAATGTgtgagaaatgtgcagaaaggcatgagacaaaggaatgtgtagtattggggaaagtagtggtatgtgttaattgtaggggtgcccatggtgCTGGGGATTAGAAATGTTCCatgtgagagaggcaggttgaggtttccagggttagagtagtgcagaagttgtcatatgctgaggcagtgaagaaagtagagttAGATGGGTTAAGGGGGAGGAATGGGGAGAGTAGTAGAAATATCAGTATAGAGGGAGAGGCCAAAAAGTGAAATAAGTTTAATTAAGATAGGATTTTttgcatttatagcaatggttatcaatcGTACTGCAGGGATGGATCGGAAGTTTCAGAAAATGGAGGTTGTGGTAGCAGCTGcagaggtatttgggtgtgcgaGACTTAACAGCAGAAGAGTTACAGGATGTGTTAAGTGGTGATGTCCCATCCTTTTAGGGTGATGGCATGAGGTAGGAATAAATACATTCAATtagtgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1932462 True 1563 lncRNA 0.41 1 35660866 35662428

Neighbor

gene id symbol gene type direction distance location
LOC110499408 LOC106589827 coding downstream 93245 35561250 ~ 35567621 (-)
LOC110499402 LOC106589795 coding downstream 201121 35446811 ~ 35459745 (-)
LOC110499399 LOC106589794 coding downstream 228416 35429125 ~ 35432450 (-)
LOC110499397 LOC106589822 coding downstream 255255 35387849 ~ 35405611 (-)
LOC110499392 LOC106589818 coding downstream 350677 35273214 ~ 35310189 (-)
LOC110499415 LOC106589833 coding upstream 156601 35819029 ~ 35826024 (-)
LOC110499416 dnah17 coding upstream 202223 35864651 ~ 35951415 (-)
LOC110499419 LOC106589836 coding upstream 289145 35951573 ~ 35985223 (-)
LOC110499420 NA coding upstream 324083 35986511 ~ 35993622 (-)
LOC110499423 NA coding upstream 369003 36031153 ~ 36037747 (-)
G1689562 NA non-coding downstream 8490 35651704 ~ 35652376 (-)
G1689560 NA non-coding downstream 10496 35649574 ~ 35650370 (-)
G1689558 NA non-coding downstream 13402 35647026 ~ 35647464 (-)
G1689557 NA non-coding downstream 14379 35644722 ~ 35646487 (-)
G1689536 rufy2 non-coding downstream 24269 35634796 ~ 35636597 (-)
G1689576 NA non-coding upstream 13390 35675818 ~ 35676656 (-)
G1689577 NA non-coding upstream 16135 35678563 ~ 35679419 (-)
G1689541 NA non-coding upstream 40222 35702650 ~ 35703917 (-)
G1689862 NA non-coding upstream 85534 35747962 ~ 35751437 (-)
G1689884 NA non-coding upstream 140480 35802908 ~ 35805095 (-)
G1689556 NA other downstream 17089 35643368 ~ 35643777 (-)
G1689461 NA other downstream 180809 35478114 ~ 35480057 (-)
G1689131 NA other downstream 400658 35259886 ~ 35260208 (-)
G1689130 NA other downstream 401048 35258989 ~ 35259818 (-)
G1687007 LOC106589782 other downstream 2116628 33531084 ~ 33544238 (-)
LOC110499427 LOC106612293 other upstream 458079 36120507 ~ 36125437 (-)
G1690367 NA other upstream 757288 36418789 ~ 36420600 (-)
G1690649 NA other upstream 1040118 36702546 ~ 36703441 (-)
G1690696 NA other upstream 1147271 36809699 ~ 36810143 (-)

Expression


Co-expression Network