G1689357


Basic Information

Item Value
gene id G1689357
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 35699249 ~ 35699456 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1932226
tctctgtgcagtcagaccTTTGGTTATTCTGTGCCAGCAGGGACACAATAATTTGCCCCCTCTCTGACTGTCCGAGAcagttactgcagctagtgttacCAGCACTGCCACTACCTGGGTGGGGGTaccccaccggaatccccacCGGCTAGATACAAGATCGTCAatgttctcattagcagctttgagcaattccttgtatattatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1932226 True 208 lncRNA 0.50 1 35699249 35699456

Neighbor

gene id symbol gene type direction distance location
LOC110499414 pbld2 coding upstream 19819 35675782 ~ 35679430 (+)
LOC110499413 LOC106589831 coding upstream 26306 35662508 ~ 35672943 (+)
LOC110499412 LOC106589830 coding upstream 36828 35651667 ~ 35662421 (+)
LOC110499411 rufy2 coding upstream 58081 35622634 ~ 35641168 (+)
LOC110499410 LOC106589828 coding upstream 94009 35571254 ~ 35605240 (+)
LOC118942012 LOC106589797 coding downstream 1744 35701200 ~ 35702156 (+)
LOC110499417 LOC106589835 coding downstream 137867 35837323 ~ 35866849 (+)
LOC118942471 NA coding downstream 184724 35884180 ~ 35884233 (+)
LOC118942065 NA coding downstream 271768 35971224 ~ 35975420 (+)
LOC110499421 LOC106612362 coding downstream 321643 36021099 ~ 36028246 (+)
G1689294 NA non-coding upstream 49883 35647067 ~ 35649366 (+)
G1689300 NA non-coding upstream 53066 35645703 ~ 35646183 (+)
G1689295 NA non-coding upstream 53661 35645262 ~ 35645588 (+)
G1689299 NA non-coding upstream 54069 35644804 ~ 35645180 (+)
G1689342 NA non-coding upstream 55417 35642917 ~ 35643832 (+)
G1689345 NA non-coding downstream 2757 35702213 ~ 35705279 (+)
G1689587 NA non-coding downstream 7197 35706653 ~ 35707228 (+)
G1689592 NA non-coding downstream 10158 35709614 ~ 35709832 (+)
G1689610 NA non-coding downstream 29505 35728961 ~ 35729163 (+)
G1689615 NA non-coding downstream 61532 35760988 ~ 35761212 (+)
G1689347 NA other upstream 16812 35681367 ~ 35682437 (+)
LOC110499396 LOC106589821 other upstream 314683 35381609 ~ 35384567 (+)
G1687675 NA other upstream 1372995 34325837 ~ 34326254 (+)
LOC118942060 LOC106589768 other upstream 2513973 33177293 ~ 33196167 (+)
G1686317 LOC106589755 other upstream 3037601 32654354 ~ 32661648 (+)
G1689671 NA other downstream 182122 35881578 ~ 35881874 (+)
G1689732 LOC106612293 other downstream 421160 36120616 ~ 36125390 (+)
G1690092 NA other downstream 565204 36264660 ~ 36264981 (+)
G1690099 NA other downstream 576026 36275482 ~ 36275943 (+)

Expression


Co-expression Network