G1689587


Basic Information

Item Value
gene id G1689587
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 35706653 ~ 35707228 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1932486
agagagagagagagaaagaaagaattagagagagcatacttaaattcacacaggacaccggataagacaggagaaatactccagatataacaaactgaccctagttctacgacacataaactactgcagcataaatactggaggctgagacaggaggggtcaggagacactgtggccccatccgatgacacccccggcaGCAGCAACTCAAGAGGGAGCCACCAACACAGAGGATAATGAGGTgctggacagaggaggcagactcAATTCTGCAGGACTATTTTGAGAAtactgattggaatatgttcaaAGATTCATCCAACCAGGACTCATCCATCAACATTGAGGGATATATATcatcagtcacaggcttcattaGGAAATGTGTGGATGTTTTACCCACAATAACAATGTGGACATATCCCAACTAAAATCCCTGAATGAACAGAGATCTCTGTACAATGCTGAGAGCCCGTAATGCAGCATTCAATGTCAGCAGAATGGACCCAGGGGTCAAGTTTTACACCTGTAAATAAATATTGGACAATAAATTgggccttcctgtattatactgac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106513962

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1932486 True 576 lncRNA 0.44 1 35706653 35707228

Neighbor

gene id symbol gene type direction distance location
LOC118942012 LOC106589797 coding upstream 4497 35701200 ~ 35702156 (+)
LOC110499414 pbld2 coding upstream 27223 35675782 ~ 35679430 (+)
LOC110499413 LOC106589831 coding upstream 33710 35662508 ~ 35672943 (+)
LOC110499412 LOC106589830 coding upstream 44232 35651667 ~ 35662421 (+)
LOC110499411 rufy2 coding upstream 65485 35622634 ~ 35641168 (+)
LOC110499417 LOC106589835 coding downstream 130095 35837323 ~ 35866849 (+)
LOC118942471 NA coding downstream 176952 35884180 ~ 35884233 (+)
LOC118942065 NA coding downstream 263996 35971224 ~ 35975420 (+)
LOC110499421 LOC106612362 coding downstream 313871 36021099 ~ 36028246 (+)
LOC110499422 arl3 coding downstream 330494 36037722 ~ 36046077 (+)
G1689345 NA non-coding upstream 1374 35702213 ~ 35705279 (+)
G1689357 NA non-coding upstream 7197 35699249 ~ 35699456 (+)
G1689294 NA non-coding upstream 57287 35647067 ~ 35649366 (+)
G1689300 NA non-coding upstream 60470 35645703 ~ 35646183 (+)
G1689295 NA non-coding upstream 61065 35645262 ~ 35645588 (+)
G1689592 NA non-coding downstream 2386 35709614 ~ 35709832 (+)
G1689610 NA non-coding downstream 21733 35728961 ~ 35729163 (+)
G1689615 NA non-coding downstream 53760 35760988 ~ 35761212 (+)
G1689598 NA non-coding downstream 172857 35880085 ~ 35880513 (+)
G1689672 NA non-coding downstream 176340 35883568 ~ 35883939 (+)
G1689347 NA other upstream 24216 35681367 ~ 35682437 (+)
LOC110499396 LOC106589821 other upstream 322087 35381609 ~ 35384567 (+)
G1687675 NA other upstream 1380399 34325837 ~ 34326254 (+)
LOC118942060 LOC106589768 other upstream 2521377 33177293 ~ 33196167 (+)
G1689671 NA other downstream 174350 35881578 ~ 35881874 (+)
G1689732 LOC106612293 other downstream 413388 36120616 ~ 36125390 (+)
G1690092 NA other downstream 557432 36264660 ~ 36264981 (+)
G1690099 NA other downstream 568254 36275482 ~ 36275943 (+)
G1690116 NA other downstream 597711 36304939 ~ 36312698 (+)

Expression


Co-expression Network