G1689615


Basic Information

Item Value
gene id G1689615
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 35760988 ~ 35761212 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1932530
ggactcacctggactctattaCTCTATTAATGCCGTTTTgttccccctgtccagacgctgttcttgtTTTGTTATGCGTCCGTTTATCCATTAAatcttcactccctgtacttgcttctcgtctcccagcatCTGTCCTTACAGATGAGACTtctgaaagacagagacaacatgTGGAGAAGACttttgagagacagagacacaattCTGCTTTGTTTCTTACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1932530 True 225 lncRNA 0.44 1 35760988 35761212

Neighbor

gene id symbol gene type direction distance location
LOC118942012 LOC106589797 coding upstream 58832 35701200 ~ 35702156 (+)
LOC110499414 pbld2 coding upstream 81558 35675782 ~ 35679430 (+)
LOC110499413 LOC106589831 coding upstream 88045 35662508 ~ 35672943 (+)
LOC110499412 LOC106589830 coding upstream 98567 35651667 ~ 35662421 (+)
LOC110499411 rufy2 coding upstream 119820 35622634 ~ 35641168 (+)
LOC110499417 LOC106589835 coding downstream 76111 35837323 ~ 35866849 (+)
LOC118942471 NA coding downstream 122968 35884180 ~ 35884233 (+)
LOC118942065 NA coding downstream 210012 35971224 ~ 35975420 (+)
LOC110499421 LOC106612362 coding downstream 259887 36021099 ~ 36028246 (+)
LOC110499422 arl3 coding downstream 276510 36037722 ~ 36046077 (+)
G1689610 NA non-coding upstream 31825 35728961 ~ 35729163 (+)
G1689592 NA non-coding upstream 51156 35709614 ~ 35709832 (+)
G1689587 NA non-coding upstream 53760 35706653 ~ 35707228 (+)
G1689345 NA non-coding upstream 55709 35702213 ~ 35705279 (+)
G1689357 NA non-coding upstream 61532 35699249 ~ 35699456 (+)
G1689598 NA non-coding downstream 118873 35880085 ~ 35880513 (+)
G1689672 NA non-coding downstream 122356 35883568 ~ 35883939 (+)
G1689676 NA non-coding downstream 128389 35889601 ~ 35889827 (+)
G1689681 LOC106589838 non-coding downstream 135003 35896215 ~ 36066349 (+)
G1689758 NA non-coding downstream 237483 35998695 ~ 36000062 (+)
G1689347 NA other upstream 78551 35681367 ~ 35682437 (+)
LOC110499396 LOC106589821 other upstream 376422 35381609 ~ 35384567 (+)
G1687675 NA other upstream 1434734 34325837 ~ 34326254 (+)
LOC118942060 LOC106589768 other upstream 2575712 33177293 ~ 33196167 (+)
G1689671 NA other downstream 120366 35881578 ~ 35881874 (+)
G1689732 LOC106612293 other downstream 359404 36120616 ~ 36125390 (+)
G1690092 NA other downstream 503448 36264660 ~ 36264981 (+)
G1690099 NA other downstream 514270 36275482 ~ 36275943 (+)
G1690116 NA other downstream 543727 36304939 ~ 36312698 (+)

Expression


Co-expression Network