G1689672


Basic Information

Item Value
gene id G1689672
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 35883568 ~ 35883939 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1932588
ttagatatctctgttttctatatattttggttaggtcagggtgtgactagggtgggtactctagtttttgtatgtctaggggttttgtaggtctaggggtttttgtatgtctatgttggcctgatatggttcccaatcagagacagctgtttatcgttgtctctgattggggatcatatttaggcacccctttttcccactttctagtgtgggatcttgactatgtgtagttgcctgtcagcactattTTGTATAGCGTTTTGTTTGttctttatttgttttgtttagtgAGTTTCCgtttattaaaatatgtggaacgctgcgccttggtctcattcaTACGACGACCGTGACAAGCAatctgtagtatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1932588 True 372 lncRNA 0.40 1 35883568 35883939

Neighbor

gene id symbol gene type direction distance location
LOC110499417 LOC106589835 coding upstream 16719 35837323 ~ 35866849 (+)
LOC118942012 LOC106589797 coding upstream 181412 35701200 ~ 35702156 (+)
LOC110499414 pbld2 coding upstream 204138 35675782 ~ 35679430 (+)
LOC110499413 LOC106589831 coding upstream 210625 35662508 ~ 35672943 (+)
LOC110499412 LOC106589830 coding upstream 221147 35651667 ~ 35662421 (+)
LOC118942471 NA coding downstream 241 35884180 ~ 35884233 (+)
LOC118942065 NA coding downstream 87285 35971224 ~ 35975420 (+)
LOC110499421 LOC106612362 coding downstream 137160 36021099 ~ 36028246 (+)
LOC110499422 arl3 coding downstream 153783 36037722 ~ 36046077 (+)
LOC110499426 LOC106589844 coding downstream 241564 36125503 ~ 36157782 (+)
G1689598 NA non-coding upstream 3055 35880085 ~ 35880513 (+)
G1689615 NA non-coding upstream 122356 35760988 ~ 35761212 (+)
G1689610 NA non-coding upstream 154405 35728961 ~ 35729163 (+)
G1689592 NA non-coding upstream 173736 35709614 ~ 35709832 (+)
G1689587 NA non-coding upstream 176340 35706653 ~ 35707228 (+)
G1689676 NA non-coding downstream 5662 35889601 ~ 35889827 (+)
G1689681 LOC106589838 non-coding downstream 12276 35896215 ~ 36066349 (+)
G1689758 NA non-coding downstream 114756 35998695 ~ 36000062 (+)
G1689771 NA non-coding downstream 140309 36024248 ~ 36085501 (+)
G1689779 NA non-coding downstream 156022 36039961 ~ 36090987 (+)
G1689671 NA other upstream 1694 35881578 ~ 35881874 (+)
G1689347 NA other upstream 201131 35681367 ~ 35682437 (+)
LOC110499396 LOC106589821 other upstream 499002 35381609 ~ 35384567 (+)
G1687675 NA other upstream 1557314 34325837 ~ 34326254 (+)
G1689732 LOC106612293 other downstream 236677 36120616 ~ 36125390 (+)
G1690092 NA other downstream 380721 36264660 ~ 36264981 (+)
G1690099 NA other downstream 391543 36275482 ~ 36275943 (+)
G1690116 NA other downstream 421000 36304939 ~ 36312698 (+)
G1690753 NA other downstream 994112 36878051 ~ 36880738 (+)

Expression


Co-expression Network