G1689779


Basic Information

Item Value
gene id G1689779
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 36039961 ~ 36090987 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1932726
caaaatggcttaaggacaggaaaattatgtggatatattgaagcaacatctcaagacatcagtcaggaagttaaagcttggtcgcaaatgggtcttccaaatgaacaatgaccccaagcatacttccaaagttgtggcaaaatggcttaaggacaacaaagtcaaggtattggagtggccatcacaaagccctgacctcaatcctatagaaaatctgtaggcagaactgaaaaagcgtgtgcgagcaaggaggcctacaaacctgactcagttacaccagctctgtcaggaggaatgggccaaaattacccaacttattgtgggaagcttgtggaaggctacctgaaacatttgacccaagttaaacaatttaaaggcaatgctaccaaataccaattgagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1932726 True 402 lncRNA 0.43 2 36039961 36090987

Neighbor

gene id symbol gene type direction distance location
LOC110499421 LOC106612362 coding upstream 11715 36021099 ~ 36028246 (+)
LOC118942065 NA coding upstream 64541 35971224 ~ 35975420 (+)
LOC118942471 NA coding upstream 155728 35884180 ~ 35884233 (+)
LOC110499417 LOC106589835 coding upstream 173112 35837323 ~ 35866849 (+)
LOC118942012 LOC106589797 coding upstream 337805 35701200 ~ 35702156 (+)
LOC110499426 LOC106589844 coding downstream 34516 36125503 ~ 36157782 (+)
LOC110499428 LOC106589848 coding downstream 70216 36161203 ~ 36170899 (+)
mrpl27 LOC106589850 coding downstream 82201 36173188 ~ 36179601 (+)
LOC110499432 LOC106589856 coding downstream 116391 36207378 ~ 36247512 (+)
LOC118942466 NA coding downstream 332759 36423746 ~ 36423861 (+)
G1689758 NA non-coding upstream 39899 35998695 ~ 36000062 (+)
G1689676 NA non-coding upstream 150134 35889601 ~ 35889827 (+)
G1689672 NA non-coding upstream 156022 35883568 ~ 35883939 (+)
G1689598 NA non-coding upstream 159448 35880085 ~ 35880513 (+)
G1689615 NA non-coding upstream 278749 35760988 ~ 35761212 (+)
G1689809 NA non-coding downstream 9555 36100542 ~ 36102150 (+)
G1689817 NA non-coding downstream 24191 36115178 ~ 36115479 (+)
G1689818 NA non-coding downstream 24602 36115589 ~ 36115868 (+)
G1689835 NA non-coding downstream 68952 36159939 ~ 36160239 (+)
G1689843 NA non-coding downstream 94193 36185180 ~ 36185495 (+)
G1689671 NA other upstream 158087 35881578 ~ 35881874 (+)
G1689347 NA other upstream 357524 35681367 ~ 35682437 (+)
LOC110499396 LOC106589821 other upstream 655395 35381609 ~ 35384567 (+)
G1687675 NA other upstream 1713707 34325837 ~ 34326254 (+)
G1689732 LOC106612293 other downstream 29629 36120616 ~ 36125390 (+)
G1690092 NA other downstream 173673 36264660 ~ 36264981 (+)
G1690099 NA other downstream 184495 36275482 ~ 36275943 (+)
G1690116 NA other downstream 213952 36304939 ~ 36312698 (+)
G1690753 NA other downstream 787064 36878051 ~ 36880738 (+)

Expression


Co-expression Network