G1689817


Basic Information

Item Value
gene id G1689817
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 36115178 ~ 36115479 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1932766
GCATAGGCATGTGACATGTAAAGACATTTTAGGAGAAACATTTAAAATCCCAAAAGCGTTAGCAATACATTTAATGTGTAAGCTCAATAAAGCCTTACTGTAGATGCGTCTTATTGTCTTTGGAGAAGATGTTGCACAATCCTTCATGGAATGGATGGCTGATGTCATCCGTTGCTTCTTCAAAAACCGTTTCAAACTTGGTGTAAAAAGCATGCAGTATGAATGCAGTAAGTGTGCAACTCTGCACAGCTTTGATTTCTGTCTGTAAACGAAAAGGTCTCTACAAATAAAAtctattattc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1932766 True 302 lncRNA 0.37 1 36115178 36115479

Neighbor

gene id symbol gene type direction distance location
LOC110499422 arl3 coding upstream 69101 36037722 ~ 36046077 (+)
LOC110499421 LOC106612362 coding upstream 86932 36021099 ~ 36028246 (+)
LOC118942065 NA coding upstream 139758 35971224 ~ 35975420 (+)
LOC118942471 NA coding upstream 230945 35884180 ~ 35884233 (+)
LOC110499417 LOC106589835 coding upstream 248329 35837323 ~ 35866849 (+)
LOC110499426 LOC106589844 coding downstream 10024 36125503 ~ 36157782 (+)
LOC110499428 LOC106589848 coding downstream 45724 36161203 ~ 36170899 (+)
mrpl27 LOC106589850 coding downstream 57709 36173188 ~ 36179601 (+)
LOC110499432 LOC106589856 coding downstream 91899 36207378 ~ 36247512 (+)
LOC118942466 NA coding downstream 308267 36423746 ~ 36423861 (+)
G1689809 NA non-coding upstream 13028 36100542 ~ 36102150 (+)
G1689779 NA non-coding upstream 24191 36039961 ~ 36090987 (+)
G1689771 NA non-coding upstream 29677 36024248 ~ 36085501 (+)
G1689681 LOC106589838 non-coding upstream 48829 35896215 ~ 36066349 (+)
G1689737 NA non-coding upstream 53302 36055215 ~ 36061876 (+)
G1689818 NA non-coding downstream 110 36115589 ~ 36115868 (+)
G1689835 NA non-coding downstream 44460 36159939 ~ 36160239 (+)
G1689843 NA non-coding downstream 69701 36185180 ~ 36185495 (+)
G1689845 NA non-coding downstream 72812 36188291 ~ 36188507 (+)
G1689849 NA non-coding downstream 80628 36196107 ~ 36196451 (+)
G1689671 NA other upstream 233304 35881578 ~ 35881874 (+)
LOC118942012 LOC106589797 other upstream 413039 35701200 ~ 35702156 (+)
G1689347 NA other upstream 432741 35681367 ~ 35682437 (+)
LOC110499396 LOC106589821 other upstream 730612 35381609 ~ 35384567 (+)
G1687675 NA other upstream 1788924 34325837 ~ 34326254 (+)
G1689732 LOC106612293 other downstream 5137 36120616 ~ 36125390 (+)
G1690092 NA other downstream 149181 36264660 ~ 36264981 (+)
G1690099 NA other downstream 160003 36275482 ~ 36275943 (+)
G1690116 NA other downstream 189460 36304939 ~ 36312698 (+)
G1690753 NA other downstream 762572 36878051 ~ 36880738 (+)

Expression


Co-expression Network