G1689818


Basic Information

Item Value
gene id G1689818
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 36115589 ~ 36115868 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1932767
CTTGTATCAAATACACAGTGTTTATTGCTTTGAATGGTATATAAAAGTAATAAACAGCAGACGCCGTGTTGGAGTATCTAATGTACATGTTTGTGTTCGCACCAATGATGTGTTTGTTCAAACAGAGGCGTCTAGAGGGAAAGGGTGCTCCATGGGAAAGGGTGCTCCGTGGGAAAGGGTGCTCCGTGGGAAAGGGTGCTCCGTGGGAAAGGGTGCTCCGTGGGAAAGGGTGCTCCGTGGGAAAGGGTGCTCCGTGGGAAAGGGTGCTCCGTGGGAAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1932767 True 280 lncRNA 0.51 1 36115589 36115868

Neighbor

gene id symbol gene type direction distance location
LOC110499422 arl3 coding upstream 69512 36037722 ~ 36046077 (+)
LOC110499421 LOC106612362 coding upstream 87343 36021099 ~ 36028246 (+)
LOC118942065 NA coding upstream 140169 35971224 ~ 35975420 (+)
LOC118942471 NA coding upstream 231356 35884180 ~ 35884233 (+)
LOC110499417 LOC106589835 coding upstream 248740 35837323 ~ 35866849 (+)
LOC110499426 LOC106589844 coding downstream 9635 36125503 ~ 36157782 (+)
LOC110499428 LOC106589848 coding downstream 45335 36161203 ~ 36170899 (+)
mrpl27 LOC106589850 coding downstream 57320 36173188 ~ 36179601 (+)
LOC110499432 LOC106589856 coding downstream 91510 36207378 ~ 36247512 (+)
LOC118942466 NA coding downstream 307878 36423746 ~ 36423861 (+)
G1689817 NA non-coding upstream 110 36115178 ~ 36115479 (+)
G1689809 NA non-coding upstream 13439 36100542 ~ 36102150 (+)
G1689779 NA non-coding upstream 24602 36039961 ~ 36090987 (+)
G1689835 NA non-coding downstream 44071 36159939 ~ 36160239 (+)
G1689843 NA non-coding downstream 69312 36185180 ~ 36185495 (+)
G1689845 NA non-coding downstream 72423 36188291 ~ 36188507 (+)
G1689849 NA non-coding downstream 80239 36196107 ~ 36196451 (+)
G1690078 NA non-coding downstream 131940 36247808 ~ 36248254 (+)
G1689671 NA other upstream 233715 35881578 ~ 35881874 (+)
LOC118942012 LOC106589797 other upstream 413450 35701200 ~ 35702156 (+)
G1689347 NA other upstream 433152 35681367 ~ 35682437 (+)
LOC110499396 LOC106589821 other upstream 731023 35381609 ~ 35384567 (+)
G1687675 NA other upstream 1789335 34325837 ~ 34326254 (+)
G1689732 LOC106612293 other downstream 4748 36120616 ~ 36125390 (+)
G1690092 NA other downstream 148792 36264660 ~ 36264981 (+)
G1690099 NA other downstream 159614 36275482 ~ 36275943 (+)
G1690116 NA other downstream 189071 36304939 ~ 36312698 (+)
G1690753 NA other downstream 762183 36878051 ~ 36880738 (+)

Expression


Co-expression Network