G1689843



Basic Information


Item Value
gene id G1689843
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 36185180 ~ 36185495 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1932795
cactaacatgacccctctatggaaataTGACTATTTcattacatgtacagtgcatgtcggttgttttgctctaggacgccgacaagcctcacaagactcgtctgaaggtagcccagtaccagttttaaaaaatgaatggaagtacctTCTGTGTGGAAGTAGTTCAGTGCCTAAAAAAGGGGCTAAATATGTGTAAAAACAAATACATCTCCTGATCTTTATTtaatctctcagatataggacatcTGTTTTTCCATGTACGAATCTGTTATTCATGCATTTCTataggctaatagcagtaaggccaaattcaatg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1932795 True 316 lncRNA 0.38 1 36185180 36185495

Neighbor


gene id symbol gene type direction distance location
mrpl27 LOC106589850 coding upstream 5579 36173188 ~ 36179601 (+)
LOC110499428 LOC106589848 coding upstream 14281 36161203 ~ 36170899 (+)
LOC110499426 LOC106589844 coding upstream 27398 36125503 ~ 36157782 (+)
LOC110499422 arl3 coding upstream 139103 36037722 ~ 36046077 (+)
LOC110499421 LOC106612362 coding upstream 156934 36021099 ~ 36028246 (+)
LOC110499432 LOC106589856 coding downstream 21883 36207378 ~ 36247512 (+)
LOC118942466 NA coding downstream 238251 36423746 ~ 36423861 (+)
LOC110499434 LOC106589860 coding downstream 251710 36437205 ~ 36540905 (+)
LOC110499435 LOC106589861 coding downstream 368384 36468873 ~ 36564830 (+)
LOC118942015 LOC106589862 coding downstream 393231 36578726 ~ 36592198 (+)
G1689835 NA non-coding upstream 24941 36159939 ~ 36160239 (+)
G1689818 NA non-coding upstream 69312 36115589 ~ 36115868 (+)
G1689817 NA non-coding upstream 69701 36115178 ~ 36115479 (+)
G1689809 NA non-coding upstream 83030 36100542 ~ 36102150 (+)
G1689737 NA non-coding upstream 123304 36055215 ~ 36061876 (+)
G1689845 NA non-coding downstream 2796 36188291 ~ 36188507 (+)
G1689849 NA non-coding downstream 10612 36196107 ~ 36196451 (+)
G1690078 NA non-coding downstream 62313 36247808 ~ 36248254 (+)
G1690088 NA non-coding downstream 64601 36250096 ~ 36250415 (+)
G1690089 NA non-coding downstream 69321 36254816 ~ 36255336 (+)
G1689732 LOC106612293 other upstream 59790 36120616 ~ 36125390 (+)
G1689671 NA other upstream 303306 35881578 ~ 35881874 (+)
LOC118942012 LOC106589797 other upstream 483041 35701200 ~ 35702156 (+)
G1689347 NA other upstream 502743 35681367 ~ 35682437 (+)
LOC110499396 LOC106589821 other upstream 800614 35381609 ~ 35384567 (+)
G1690092 NA other downstream 79165 36264660 ~ 36264981 (+)
G1690099 NA other downstream 89987 36275482 ~ 36275943 (+)
G1690116 NA other downstream 119444 36304939 ~ 36312698 (+)
G1690753 NA other downstream 692556 36878051 ~ 36880738 (+)
G1691142 NA other downstream 1356425 37541920 ~ 37543265 (+)

Expression



Co-expression Network