Item | Value |
---|---|
gene id | G1689843 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048584.1 |
NCBI id | CM023238.2 |
chromosome length | 46616863 |
location | 36185180 ~ 36185495 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1932795 | True | 316 | lncRNA | 0.38 | 1 | 36185180 | 36185495 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
mrpl27 | LOC106589850 | coding | upstream | 5579 | 36173188 ~ 36179601 (+) |
LOC110499428 | LOC106589848 | coding | upstream | 14281 | 36161203 ~ 36170899 (+) |
LOC110499426 | LOC106589844 | coding | upstream | 27398 | 36125503 ~ 36157782 (+) |
LOC110499422 | arl3 | coding | upstream | 139103 | 36037722 ~ 36046077 (+) |
LOC110499421 | LOC106612362 | coding | upstream | 156934 | 36021099 ~ 36028246 (+) |
LOC110499432 | LOC106589856 | coding | downstream | 21883 | 36207378 ~ 36247512 (+) |
LOC118942466 | NA | coding | downstream | 238251 | 36423746 ~ 36423861 (+) |
LOC110499434 | LOC106589860 | coding | downstream | 251710 | 36437205 ~ 36540905 (+) |
LOC110499435 | LOC106589861 | coding | downstream | 368384 | 36468873 ~ 36564830 (+) |
LOC118942015 | LOC106589862 | coding | downstream | 393231 | 36578726 ~ 36592198 (+) |
G1689835 | NA | non-coding | upstream | 24941 | 36159939 ~ 36160239 (+) |
G1689818 | NA | non-coding | upstream | 69312 | 36115589 ~ 36115868 (+) |
G1689817 | NA | non-coding | upstream | 69701 | 36115178 ~ 36115479 (+) |
G1689809 | NA | non-coding | upstream | 83030 | 36100542 ~ 36102150 (+) |
G1689737 | NA | non-coding | upstream | 123304 | 36055215 ~ 36061876 (+) |
G1689845 | NA | non-coding | downstream | 2796 | 36188291 ~ 36188507 (+) |
G1689849 | NA | non-coding | downstream | 10612 | 36196107 ~ 36196451 (+) |
G1690078 | NA | non-coding | downstream | 62313 | 36247808 ~ 36248254 (+) |
G1690088 | NA | non-coding | downstream | 64601 | 36250096 ~ 36250415 (+) |
G1690089 | NA | non-coding | downstream | 69321 | 36254816 ~ 36255336 (+) |
G1689732 | LOC106612293 | other | upstream | 59790 | 36120616 ~ 36125390 (+) |
G1689671 | NA | other | upstream | 303306 | 35881578 ~ 35881874 (+) |
LOC118942012 | LOC106589797 | other | upstream | 483041 | 35701200 ~ 35702156 (+) |
G1689347 | NA | other | upstream | 502743 | 35681367 ~ 35682437 (+) |
LOC110499396 | LOC106589821 | other | upstream | 800614 | 35381609 ~ 35384567 (+) |
G1690092 | NA | other | downstream | 79165 | 36264660 ~ 36264981 (+) |
G1690099 | NA | other | downstream | 89987 | 36275482 ~ 36275943 (+) |
G1690116 | NA | other | downstream | 119444 | 36304939 ~ 36312698 (+) |
G1690753 | NA | other | downstream | 692556 | 36878051 ~ 36880738 (+) |
G1691142 | NA | other | downstream | 1356425 | 37541920 ~ 37543265 (+) |