G1689845


Basic Information

Item Value
gene id G1689845
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 36188291 ~ 36188507 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1932797
attctgttctattctatctTTACAATTAGTAACGTAGCAGCAACAACAAAGGCATGACAACAGTTCAATACAAATCTCCAATAAATTAACCTCAAGCCAGATTACTCAGGCGGTGATGGAGTAACTTGGCTATAGAGCTGTAATTACATTTTCTTCATGCCCAATAATATACTCCACTCAATATACTCCAATCAGTCTTGTTAAGGGCTACCAGAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1932797 True 217 lncRNA 0.37 1 36188291 36188507

Neighbor

gene id symbol gene type direction distance location
mrpl27 LOC106589850 coding upstream 8690 36173188 ~ 36179601 (+)
LOC110499428 LOC106589848 coding upstream 17392 36161203 ~ 36170899 (+)
LOC110499426 LOC106589844 coding upstream 30509 36125503 ~ 36157782 (+)
LOC110499422 arl3 coding upstream 142214 36037722 ~ 36046077 (+)
LOC110499421 LOC106612362 coding upstream 160045 36021099 ~ 36028246 (+)
LOC110499432 LOC106589856 coding downstream 18871 36207378 ~ 36247512 (+)
LOC118942466 NA coding downstream 235239 36423746 ~ 36423861 (+)
LOC110499434 LOC106589860 coding downstream 248698 36437205 ~ 36540905 (+)
LOC110499435 LOC106589861 coding downstream 365372 36468873 ~ 36564830 (+)
LOC118942015 LOC106589862 coding downstream 390219 36578726 ~ 36592198 (+)
G1689843 NA non-coding upstream 2796 36185180 ~ 36185495 (+)
G1689835 NA non-coding upstream 28052 36159939 ~ 36160239 (+)
G1689818 NA non-coding upstream 72423 36115589 ~ 36115868 (+)
G1689817 NA non-coding upstream 72812 36115178 ~ 36115479 (+)
G1689809 NA non-coding upstream 86141 36100542 ~ 36102150 (+)
G1689849 NA non-coding downstream 7600 36196107 ~ 36196451 (+)
G1690078 NA non-coding downstream 59301 36247808 ~ 36248254 (+)
G1690088 NA non-coding downstream 61589 36250096 ~ 36250415 (+)
G1690089 NA non-coding downstream 66309 36254816 ~ 36255336 (+)
G1690091 LOC106589857 non-coding downstream 73267 36261774 ~ 36263131 (+)
G1689732 LOC106612293 other upstream 62901 36120616 ~ 36125390 (+)
G1689671 NA other upstream 306417 35881578 ~ 35881874 (+)
LOC118942012 LOC106589797 other upstream 486152 35701200 ~ 35702156 (+)
G1689347 NA other upstream 505854 35681367 ~ 35682437 (+)
LOC110499396 LOC106589821 other upstream 803725 35381609 ~ 35384567 (+)
G1690092 NA other downstream 76153 36264660 ~ 36264981 (+)
G1690099 NA other downstream 86975 36275482 ~ 36275943 (+)
G1690116 NA other downstream 116432 36304939 ~ 36312698 (+)
G1690753 NA other downstream 689544 36878051 ~ 36880738 (+)
G1691142 NA other downstream 1353413 37541920 ~ 37543265 (+)

Expression


Co-expression Network