G1690106


Basic Information

Item Value
gene id G1690106
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 36285133 ~ 36285372 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1933102
tccactcttctgggaaggctttccactagatgttggaacactgctgcagggacttgcttccattcagccacaagagcattaatgaggtcgggcactgatgttgggcaatcaggcctggctcacagtcggtgtaccaattcatcccaaaggtgttcaatggggttgaggtcagggctctgtgcaggccagtcaagttcttccacaccgatcttgaaaaacctttgggatgaattgtaacac

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1933102 True 240 lncRNA 0.50 1 36285133 36285372

Neighbor

gene id symbol gene type direction distance location
LOC110499432 LOC106589856 coding upstream 37621 36207378 ~ 36247512 (+)
mrpl27 LOC106589850 coding upstream 105532 36173188 ~ 36179601 (+)
LOC110499428 LOC106589848 coding upstream 114234 36161203 ~ 36170899 (+)
LOC110499426 LOC106589844 coding upstream 127351 36125503 ~ 36157782 (+)
LOC110499422 arl3 coding upstream 239056 36037722 ~ 36046077 (+)
LOC118942466 NA coding downstream 138374 36423746 ~ 36423861 (+)
LOC110499434 LOC106589860 coding downstream 151833 36437205 ~ 36540905 (+)
LOC110499435 LOC106589861 coding downstream 268507 36468873 ~ 36564830 (+)
LOC118942015 LOC106589862 coding downstream 293354 36578726 ~ 36592198 (+)
LOC110499541 ankfn1 coding downstream 410403 36695775 ~ 36809459 (+)
G1690098 NA non-coding upstream 10006 36274888 ~ 36275127 (+)
G1690095 NA non-coding upstream 17428 36267505 ~ 36267705 (+)
G1690094 NA non-coding upstream 18268 36266564 ~ 36266865 (+)
G1690093 NA non-coding upstream 19015 36265884 ~ 36266118 (+)
G1690092 NA non-coding upstream 20152 36264660 ~ 36264981 (+)
G1690134 NA non-coding downstream 48745 36334117 ~ 36334936 (+)
G1690139 LOC106589859 non-coding downstream 58919 36344291 ~ 36346030 (+)
G1690143 NA non-coding downstream 63471 36348843 ~ 36350560 (+)
G1690176 NA non-coding downstream 123870 36409242 ~ 36412502 (+)
G1690099 NA other upstream 9190 36275482 ~ 36275943 (+)
G1689732 LOC106612293 other upstream 159743 36120616 ~ 36125390 (+)
G1689671 NA other upstream 403259 35881578 ~ 35881874 (+)
LOC118942012 LOC106589797 other upstream 582994 35701200 ~ 35702156 (+)
G1690116 NA other downstream 19567 36304939 ~ 36312698 (+)
G1690753 NA other downstream 592679 36878051 ~ 36880738 (+)
G1691142 NA other downstream 1256548 37541920 ~ 37543265 (+)
G1691189 NA other downstream 1365254 37650626 ~ 37654064 (+)
G1691267 NA other downstream 1519171 37804543 ~ 37809061 (+)

Expression


Co-expression Network