G1690134


Basic Information

Item Value
gene id G1690134
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 36334117 ~ 36334936 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1933137
gcatttcactgtaaggtttgtATACCGTTTGTATTTGGCACGTGTAtttggcatttcactgtaaggttgtatacctgttgtatttggcatttcactgtaaggttgtatacAGTTTGTAtttggcatttcactgtaaggttgtatacctgttgtatttggcatttcactgtaaggttgtatacCGTTTGTAtttggcatttcactgtaaggttgtatacCGTTTGTAtttggcatttcactgtaaggttgtatacctgttgtatttggcatttcactgtaaggttgtatacctgttgtatttggcatttcactgtaaggttgtatacctgttgtatttggcatttcactgtaaggttgtatacctgttgtatttggcatttcactgtaaggttgtatacCGTTTGTAtttggcatttcactgtaaggttgtatacctgttgtatttggcatttcactgtaaggttgtatacctgttgtatttggcatttcactgtaaggttgtatactgtttgtatttggcacgtgacaaataagttttcatttgtttaacaacAAAATAAAATCTGTCATGACAACTGAATGGGGTACTTTTTGTTTATCACCTGTGCTATAGACTTTTCCTTCACAAGGACAATAATAT

Function

NR:

description
uncharacterized protein LOC110491270, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1933137 True 640 lncRNA 0.35 2 36334117 36334936

Neighbor

gene id symbol gene type direction distance location
LOC110499432 LOC106589856 coding upstream 86605 36207378 ~ 36247512 (+)
mrpl27 LOC106589850 coding upstream 154516 36173188 ~ 36179601 (+)
LOC110499428 LOC106589848 coding upstream 163218 36161203 ~ 36170899 (+)
LOC110499426 LOC106589844 coding upstream 176335 36125503 ~ 36157782 (+)
LOC110499422 arl3 coding upstream 288040 36037722 ~ 36046077 (+)
LOC118942466 NA coding downstream 88810 36423746 ~ 36423861 (+)
LOC110499434 LOC106589860 coding downstream 102269 36437205 ~ 36540905 (+)
LOC110499435 LOC106589861 coding downstream 218943 36468873 ~ 36564830 (+)
LOC118942015 LOC106589862 coding downstream 243790 36578726 ~ 36592198 (+)
LOC110499541 ankfn1 coding downstream 360839 36695775 ~ 36809459 (+)
G1690106 NA non-coding upstream 48745 36285133 ~ 36285372 (+)
G1690098 NA non-coding upstream 58990 36274888 ~ 36275127 (+)
G1690095 NA non-coding upstream 66412 36267505 ~ 36267705 (+)
G1690094 NA non-coding upstream 67252 36266564 ~ 36266865 (+)
G1690093 NA non-coding upstream 67999 36265884 ~ 36266118 (+)
G1690139 LOC106589859 non-coding downstream 9355 36344291 ~ 36346030 (+)
G1690143 NA non-coding downstream 13907 36348843 ~ 36350560 (+)
G1690176 NA non-coding downstream 74306 36409242 ~ 36412502 (+)
G1690222 NA non-coding downstream 195060 36529996 ~ 36534868 (+)
G1690116 NA other upstream 21419 36304939 ~ 36312698 (+)
G1690099 NA other upstream 58174 36275482 ~ 36275943 (+)
G1690092 NA other upstream 69136 36264660 ~ 36264981 (+)
G1689732 LOC106612293 other upstream 208727 36120616 ~ 36125390 (+)
G1689671 NA other upstream 452243 35881578 ~ 35881874 (+)
G1690753 NA other downstream 543115 36878051 ~ 36880738 (+)
G1691142 NA other downstream 1206984 37541920 ~ 37543265 (+)
G1691189 NA other downstream 1315690 37650626 ~ 37654064 (+)
G1691267 NA other downstream 1469607 37804543 ~ 37809061 (+)
G1691990 aatk other downstream 1887569 38222505 ~ 38222735 (+)

Expression


Co-expression Network