G1690176


Basic Information

Item Value
gene id G1690176
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 36409242 ~ 36412502 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1933186
TGGATGTAGTTCAGGCCAGTGAAATACAAATGACAAAATACTCAAAAGTaattaaaaatatgtatttaaaatACATGTAACATAGATACTGCCCATGTCTGGTTCTAGCCAAGCGTTTAGAAGAGTCAGGACAAGTGATAAATCCATTACATGGCCCCATCAAACATCAATGTTTTGAAGTGAAACACAACTTACGTAATTTACAAATGTTACATCCAGTCTCACAATTGGAAGTCTGATTTAATCATTGGAAAAAAATGGAAAGTATTTCTGTCTGCCTATGAacgagttgaatagaaggagttgaatagaaggtgtTGAATAGAAGGTTGTCCAGTTGAATTGCTAATATAGTAATAGCCTTGACCTCTATGACAGCTTTTACATCTGGGATGACTGAAAACCTGATGATAGGAGCCTCTGCTTTGTAGTTACTGTATTTTATCCCTCGGACAGAGCCATGTGCTAAAGGACTTATGTCAAACTGTCATAATAACAGTTTTAACTTCAATATTTCAAATCATCTCAATAATGTTGTACACAATCTGTTGGATCACTTGATGTATTTGCATAGCCATGGGCAGGGGGCCTGGGTTTCGGGTAAAGCCCCACATGCGAGAGCAATTTTACAGTGCATTACTATAACCTATATGTCTAGGCCTCTATGTACGGTGAACAAATGGTAGCATAAGTTAGCGGTATAGCTGAGACAAACGCACCGTCTATAGTAGAGACGGTGTTCCTGTTTTGGGATAGCCTAGGCCCTACAGATGTAGAATATTAATTTGATCacacttttgttgctgagaattttcctgcactgcaggaaatgcaaacttgtggtGTATTTGAGTTTAAAAATGCTTGTAGTGTGTAATTTCCTCTtagacattattttcctgctgtagcaaactgtctcaaattaagatcctacctGTATGCATCCTTCTTTCCTCCCATCCTTGAACAAATCACAGATAGATGGCTTGCACGAAAATGTTTGTTTAATTGTGTGAAAATATACTTAGTTTTTACATTAGCCTACTTTGGAAAATCTGTACAAGCATTTGGATTGGTCTGTTTTGTTGATATTCTAACTCCCTTTTTACTAGCCTATGTGTTTACCCCTCTACGGGCGGTTTTGATGATGGAGGCTGGATTCCAAAAGGATGCAAACATGTATTACGAGCCATGCTTCACAGGTAGCCTATGTCACAGCGGTCCGTTTTTGCTTCCCCTTATGAGTAGGGgggtaggatttttttatttttttatttaactagacaagtcagttaagaaaaaattctaccctggccaaaccattccctaacccggacgaggctgggccaattgtgcgccgccctatgggactcctgatcccggccggttgtgatacagcccgggattgaacctggtctgtagtgacacctctaacactgcagtgccttagaccgctgcgccactcaggatcccCAACTGAGGATAAACTGAGGCCAAATCTTCCTCTGTGTTCGAGAGACCGAGAGGGGCAGCCGTGGTGCTCTCCGAGGTGAAATTAAATATTTAAGAACAGATCGAAATGTTCCACGTAACAACTTTTTAGGCACAGTTTtctaatattattataatatatttgtCAGGTAGGGTGTCAGAAAGGCCTACGGGTCTAAGTACTCAACAACTGACACTCAATAACATTTTCCTTATTTTTTCACTGCTGGAAATGTGCCTTTGTAGCCTATTGTCTTTTGCCATATGTTCCAAATGTCACTTTGCTTTTAACTCATTCTCTGAGTTATGTCGATGTAGGTCAGAAGAGCATCTTTAAAAACTTTATAATGGCCATTAACTGCACTGTAAAATATGTTCTCAAAAGAAGGATAATGAGTTGAGAAGatgtcctctctctgttgctgAAGGTCAAGCTGGCCATCAAGGGGGTCGTTCCCGAAGACCTCGGGGTGGGTAAGGCTTCCTCCGTGTCTGATGTAATCTGCTGCTAGAACGTTGGCTGGGGGGAGGAGATCTTCAGTGATTCTCGCTGCCTTTAGGTGGTTGGCAAACAAAACATCTGGAATGCCTTGGCGGGAAATGGTATGGGCATTCAATGCTGGAATTAAGTTATCTATTCCAGTTGTGCAGCATCTTCTTGCAAACGAGGAGACGCAGAACTTGGTACACAGGTCATCAATGTCCAACAAACCATCGCTTGTCATGCTGCATAGTGCGTGCTTGATGGGGTCATTTACCCTGGCATTGATTTCAACCCACTTTCTCTCTGCTTCTTGATTCTGTCTGGATTCACTCTGAATGTAAGGGGGCCTGTTGATATTGGTGCGATGTGCTTGGAGGTTGTCTTGCTGGTATAGACACAGGTAGAATTCCTTACTGTAGTCAACACTTAACTGATCGAACAAGCCATGTTTCAGACAGATGTCTCTGTAGATCTCATCATAAATGGTCAGGTTGTTCTTGATTGGCATTACTGAAAACCCCAAAATTTTGCCACTGAAACTGTCAGATGCCAGAACTTCAGTGACACCAAAATCATTGAGCTTCTCATTTTGATCCATGTAAAGTTGTTGTCCCACATATTCTGTAGGGTACACGTGAGGATTCATCTGGCTGGCGGTGCCCTCTCTTCGCATTTGAGTGTAGACTGGTTTCATCAGTATCTGTGCCTGTCTGACGCTTCTCTCTCCCAACCTGaagccagcagctcttagcataCCTGTCATGACCTTCCGGCCACAAACTGGTCCACTTCTAGTGACCGCTGCAACGATAGCATTAACACCTTCTCTTCCAAGTCGTGAGTAGTCATAGCGATGTATATCTCGTGCAGCGCAGAACTGATAGATGGACGAAGTGCTAGCTCCCCTCTCAATTCCGTATTGCGTCTCCAGAACATGTTTCACTTCACTACACGTGTATCCCAATTCCTCTACTAACCTCCGAATTATGGTTTCATAATCATTAAGAACTGACATAGCTGAATGTGATTCCAGCCAGACACTCTCTCATGAAGTTTTAATTGTGTGATCAACTCCAAAAGTAACTTTTCCTCCTTCCTAGACTCGCAAAAGCCATTGGAAGAGCAGACCAAggttcctcctctctgtccttctctaccaatgggttttgagaaggatgtGACTGGAGTtgatttccacac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1933186 True 3175 lncRNA 0.42 2 36409242 36412502

Neighbor

gene id symbol gene type direction distance location
LOC110499432 LOC106589856 coding upstream 161730 36207378 ~ 36247512 (+)
mrpl27 LOC106589850 coding upstream 229641 36173188 ~ 36179601 (+)
LOC110499428 LOC106589848 coding upstream 238343 36161203 ~ 36170899 (+)
LOC110499426 LOC106589844 coding upstream 251460 36125503 ~ 36157782 (+)
LOC110499422 arl3 coding upstream 363165 36037722 ~ 36046077 (+)
LOC118942466 NA coding downstream 11244 36423746 ~ 36423861 (+)
LOC110499434 LOC106589860 coding downstream 24703 36437205 ~ 36540905 (+)
LOC110499435 LOC106589861 coding downstream 141377 36468873 ~ 36564830 (+)
LOC118942015 LOC106589862 coding downstream 166224 36578726 ~ 36592198 (+)
LOC110499541 ankfn1 coding downstream 283273 36695775 ~ 36809459 (+)
G1690143 NA non-coding upstream 58682 36348843 ~ 36350560 (+)
G1690139 LOC106589859 non-coding upstream 63212 36344291 ~ 36346030 (+)
G1690134 NA non-coding upstream 74306 36334117 ~ 36334936 (+)
G1690106 NA non-coding upstream 123870 36285133 ~ 36285372 (+)
G1690098 NA non-coding upstream 134115 36274888 ~ 36275127 (+)
G1690222 NA non-coding downstream 117494 36529996 ~ 36534868 (+)
G1690231 NA non-coding downstream 144098 36556600 ~ 36557674 (+)
G1690232 NA non-coding downstream 147057 36559559 ~ 36560687 (+)
G1690233 NA non-coding downstream 147656 36560158 ~ 36560539 (+)
G1690116 NA other upstream 96544 36304939 ~ 36312698 (+)
G1690099 NA other upstream 133299 36275482 ~ 36275943 (+)
G1690092 NA other upstream 144261 36264660 ~ 36264981 (+)
G1689732 LOC106612293 other upstream 283852 36120616 ~ 36125390 (+)
G1689671 NA other upstream 527368 35881578 ~ 35881874 (+)
G1690753 NA other downstream 465549 36878051 ~ 36880738 (+)
G1691142 NA other downstream 1129418 37541920 ~ 37543265 (+)
G1691189 NA other downstream 1238124 37650626 ~ 37654064 (+)
G1691267 NA other downstream 1392041 37804543 ~ 37809061 (+)
G1691990 aatk other downstream 1810003 38222505 ~ 38222735 (+)

Expression


Co-expression Network