Gene
RNA
| Item | Value |
|---|---|
| gene id | G1690231 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 36556600 ~ 36557674 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1933249 | False | 515 | lncRNA | 0.41 | 3 | 36556600 | 36557674 |
| TU1933248 | True | 301 | lncRNA | 0.38 | 2 | 36556968 | 36557674 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499434 | LOC106589860 | coding | upstream | 15695 | 36437205 ~ 36540905 (+) |
| LOC118942466 | NA | coding | upstream | 132739 | 36423746 ~ 36423861 (+) |
| LOC110499432 | LOC106589856 | coding | upstream | 309088 | 36207378 ~ 36247512 (+) |
| mrpl27 | LOC106589850 | coding | upstream | 376999 | 36173188 ~ 36179601 (+) |
| LOC110499428 | LOC106589848 | coding | upstream | 385701 | 36161203 ~ 36170899 (+) |
| LOC118942015 | LOC106589862 | coding | downstream | 21052 | 36578726 ~ 36592198 (+) |
| LOC110499541 | ankfn1 | coding | downstream | 138101 | 36695775 ~ 36809459 (+) |
| LOC110499437 | nogg3 | coding | downstream | 289629 | 36847303 ~ 36849071 (+) |
| LOC118942468 | NA | coding | downstream | 346156 | 36903830 ~ 36903945 (+) |
| LOC118942068 | NA | coding | downstream | 348976 | 36906650 ~ 36909570 (+) |
| G1690222 | NA | non-coding | upstream | 21732 | 36529996 ~ 36534868 (+) |
| G1690176 | NA | non-coding | upstream | 144098 | 36409242 ~ 36412502 (+) |
| G1690143 | NA | non-coding | upstream | 206040 | 36348843 ~ 36350560 (+) |
| G1690139 | LOC106589859 | non-coding | upstream | 210570 | 36344291 ~ 36346030 (+) |
| G1690134 | NA | non-coding | upstream | 221664 | 36334117 ~ 36334936 (+) |
| G1690232 | NA | non-coding | downstream | 1885 | 36559559 ~ 36560687 (+) |
| G1690233 | NA | non-coding | downstream | 2484 | 36560158 ~ 36560539 (+) |
| G1690234 | NA | non-coding | downstream | 7225 | 36564899 ~ 36602975 (+) |
| G1690237 | NA | non-coding | downstream | 9873 | 36567547 ~ 36569470 (+) |
| G1690116 | NA | other | upstream | 243902 | 36304939 ~ 36312698 (+) |
| G1690099 | NA | other | upstream | 280657 | 36275482 ~ 36275943 (+) |
| G1690092 | NA | other | upstream | 291619 | 36264660 ~ 36264981 (+) |
| G1689732 | LOC106612293 | other | upstream | 431210 | 36120616 ~ 36125390 (+) |
| G1689671 | NA | other | upstream | 674726 | 35881578 ~ 35881874 (+) |
| G1690753 | NA | other | downstream | 320377 | 36878051 ~ 36880738 (+) |
| G1691142 | NA | other | downstream | 984246 | 37541920 ~ 37543265 (+) |
| G1691189 | NA | other | downstream | 1092952 | 37650626 ~ 37654064 (+) |
| G1691267 | NA | other | downstream | 1246869 | 37804543 ~ 37809061 (+) |
| G1691990 | aatk | other | downstream | 1664831 | 38222505 ~ 38222735 (+) |
