G1690524


Basic Information

Item Value
gene id G1690524
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 36639053 ~ 36639267 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1933589
gtatataggagATTGACTTTATTCAGTCAGTTCGACACCTTTCATAAATGAGCCAACACTTACTGTTCGGTCATCAATCAAAGTGCAGTAAATGGCCTATGCGCCCCGACTCCATGACCTGCTACAGTGTATATGAAGCGTgagaaagaaaataaatgaatgtgCCTCAAAACAATAATAAAGTGGATGTCAACTCATCATTACCACTTACATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1933589 True 215 lncRNA 0.39 1 36639053 36639267

Neighbor

gene id symbol gene type direction distance location
LOC118942015 LOC106589862 coding upstream 54963 36578726 ~ 36592198 (+)
LOC110499435 LOC106589861 coding upstream 74223 36468873 ~ 36564830 (+)
LOC110499434 LOC106589860 coding upstream 98148 36437205 ~ 36540905 (+)
LOC118942466 NA coding upstream 215192 36423746 ~ 36423861 (+)
LOC110499432 LOC106589856 coding upstream 391541 36207378 ~ 36247512 (+)
LOC110499541 ankfn1 coding downstream 56508 36695775 ~ 36809459 (+)
LOC110499437 nogg3 coding downstream 208036 36847303 ~ 36849071 (+)
LOC118942468 NA coding downstream 264563 36903830 ~ 36903945 (+)
LOC118942068 NA coding downstream 267383 36906650 ~ 36909570 (+)
LOC110499440 NA coding downstream 275057 36914324 ~ 36916187 (+)
G1690521 NA non-coding upstream 1051 36637696 ~ 36638002 (+)
G1690519 NA non-coding upstream 7242 36631585 ~ 36631811 (+)
G1690512 NA non-coding upstream 11307 36627483 ~ 36627746 (+)
G1690499 NA non-coding upstream 20172 36618414 ~ 36618881 (+)
G1690486 NA non-coding upstream 27445 36611336 ~ 36611608 (+)
G1690526 NA non-coding downstream 2203 36641470 ~ 36641858 (+)
G1690541 NA non-coding downstream 22001 36661268 ~ 36661989 (+)
G1690558 NA non-coding downstream 63054 36702321 ~ 36703211 (+)
G1690559 NA non-coding downstream 64528 36703795 ~ 36704004 (+)
G1690565 NA non-coding downstream 71107 36710374 ~ 36710596 (+)
G1690116 NA other upstream 326355 36304939 ~ 36312698 (+)
G1690099 NA other upstream 363110 36275482 ~ 36275943 (+)
G1690092 NA other upstream 374072 36264660 ~ 36264981 (+)
G1689732 LOC106612293 other upstream 513663 36120616 ~ 36125390 (+)
G1689671 NA other upstream 757179 35881578 ~ 35881874 (+)
G1690753 NA other downstream 238784 36878051 ~ 36880738 (+)
G1691142 NA other downstream 902653 37541920 ~ 37543265 (+)
G1691189 NA other downstream 1011359 37650626 ~ 37654064 (+)
G1691267 NA other downstream 1165276 37804543 ~ 37809061 (+)
G1691990 aatk other downstream 1583238 38222505 ~ 38222735 (+)

Expression


Co-expression Network