G1690541


Basic Information

Item Value
gene id G1690541
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 36661268 ~ 36661989 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1933608
gaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagataattttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttgcaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagagaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttgatttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatt

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1933608 True 722 lncRNA 0.43 1 36661268 36661989

Neighbor

gene id symbol gene type direction distance location
LOC118942015 LOC106589862 coding upstream 77178 36578726 ~ 36592198 (+)
LOC110499435 LOC106589861 coding upstream 96438 36468873 ~ 36564830 (+)
LOC110499434 LOC106589860 coding upstream 120363 36437205 ~ 36540905 (+)
LOC118942466 NA coding upstream 237407 36423746 ~ 36423861 (+)
LOC110499432 LOC106589856 coding upstream 413756 36207378 ~ 36247512 (+)
LOC110499541 ankfn1 coding downstream 33786 36695775 ~ 36809459 (+)
LOC110499437 nogg3 coding downstream 185314 36847303 ~ 36849071 (+)
LOC118942468 NA coding downstream 241841 36903830 ~ 36903945 (+)
LOC118942068 NA coding downstream 244661 36906650 ~ 36909570 (+)
LOC110499440 NA coding downstream 252335 36914324 ~ 36916187 (+)
G1690526 NA non-coding upstream 19410 36641470 ~ 36641858 (+)
G1690524 NA non-coding upstream 22001 36639053 ~ 36639267 (+)
G1690521 NA non-coding upstream 23266 36637696 ~ 36638002 (+)
G1690519 NA non-coding upstream 29457 36631585 ~ 36631811 (+)
G1690512 NA non-coding upstream 33522 36627483 ~ 36627746 (+)
G1690558 NA non-coding downstream 40332 36702321 ~ 36703211 (+)
G1690559 NA non-coding downstream 41806 36703795 ~ 36704004 (+)
G1690565 NA non-coding downstream 48385 36710374 ~ 36710596 (+)
G1690573 NA non-coding downstream 68651 36730640 ~ 36730879 (+)
G1690574 NA non-coding downstream 69044 36731033 ~ 36731255 (+)
G1690116 NA other upstream 348570 36304939 ~ 36312698 (+)
G1690099 NA other upstream 385325 36275482 ~ 36275943 (+)
G1690092 NA other upstream 396287 36264660 ~ 36264981 (+)
G1689732 LOC106612293 other upstream 535878 36120616 ~ 36125390 (+)
G1689671 NA other upstream 779394 35881578 ~ 35881874 (+)
G1690753 NA other downstream 216062 36878051 ~ 36880738 (+)
G1691142 NA other downstream 879931 37541920 ~ 37543265 (+)
G1691189 NA other downstream 988637 37650626 ~ 37654064 (+)
G1691267 NA other downstream 1142554 37804543 ~ 37809061 (+)
G1691990 aatk other downstream 1560516 38222505 ~ 38222735 (+)

Expression


Co-expression Network