G1690638


Basic Information

Item Value
gene id G1690638
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 36681673 ~ 36685196 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1933709
GATACAACACTTCACATTATGAGTTTGACTGATACTTCACATCATGAGTTTGACTGATACAACACTTCACATTATGAGTTTGACTGATACAACACTTCACATCATGAGTTTGACTGATACAACACTTCACATCATGAGTTTGACTGATACAACACTTCACATCATGAGTTTGATTGTTACAACACTTCCCAATGAGACCCAGTTTACTCATGCATAATGGTTGCATCCAAta
>TU1933710
ACTTCACATCATGAGTTTGACTGATACTTCACATCATGAGTTTGACTGATACTTCACATCATGAGTTTGACTGATACTTCACATCATGAGTTTGACTGATACTTCACATCATGATACTTCACATCATGAGTTTGACTGATACAACACTTCACATCATGAGTTTGACTGATACAACACTTCACATTATGAGTTTGACTGATACAACACTTCACATCATGAGTTTGACTGATACAACACTTCACATCATGAGTTTGACTGATACAACACTTCACATCATGAGTTTGACTGATACAACACTTCACATCATGAGTTTGATTGTTACAACACTTCCCAATGAGACCCAGTTTACTCATGCATAATGGTTGCATCCAAta
>TU1933708
TGATACTTCACATCATGAGTTTGACTGATACAACACTTCACATCATGAGTTTGACTGATACAACACTTCACATCATGAGTTTAACTGATACAACACTTCACATCATGAGTTTGACTGATACAACACTTCACATCATGAGTTTGACTGATACAACACTTCACATCATGAGTTTGACTGATACAACACTTCACATCATGAGTTTGACTGATACAACACTTCACATCATGAGTTTGATTGATAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106570759

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1933709 False 232 lncRNA 0.36 3 36681673 36684214
TU1933710 False 374 lncRNA 0.36 5 36681673 36685196
TU1933708 True 241 lncRNA 0.36 3 36682750 36683280

Neighbor

gene id symbol gene type direction distance location
LOC110499436 LOC106589862 coding downstream 88909 36583534 ~ 36592764 (-)
LOC110499433 LOC106589859 coding downstream 294001 36344254 ~ 36387672 (-)
LOC110499540 LOC106589857 coding downstream 345221 36258019 ~ 36336452 (-)
LOC110499429 LOC106589855 coding downstream 485223 36181083 ~ 36196450 (-)
LOC110499427 LOC106612293 coding downstream 556236 36120507 ~ 36125437 (-)
LOC110499438 LOC106589865 coding upstream 206650 36891846 ~ 36896982 (-)
LOC110499441 LOC106589863 coding upstream 234982 36920178 ~ 36935086 (-)
LOC118942469 NA coding upstream 261070 36946266 ~ 36946381 (-)
LOC110499443 rbfox3 coding upstream 370757 37055953 ~ 37197149 (-)
LOC110499449 LOC106589899 coding upstream 1531681 38216877 ~ 38320114 (-)
G1690634 NA non-coding downstream 5734 36675124 ~ 36675939 (-)
G1690633 NA non-coding downstream 10831 36670614 ~ 36670842 (-)
G1690631 NA non-coding downstream 15188 36666232 ~ 36666485 (-)
G1690513 NA non-coding downstream 53948 36627409 ~ 36627725 (-)
G1690507 NA non-coding downstream 58071 36623071 ~ 36623602 (-)
G1690643 NA non-coding upstream 10101 36695297 ~ 36695755 (-)
G1690652 NA non-coding upstream 24546 36709742 ~ 36710072 (-)
G1690658 NA non-coding upstream 45470 36730666 ~ 36730867 (-)
G1690659 NA non-coding upstream 46472 36731668 ~ 36731920 (-)
G1690665 NA non-coding upstream 55256 36740452 ~ 36740706 (-)
G1690367 NA other downstream 261073 36418789 ~ 36420600 (-)
LOC110499416 dnah17 other downstream 814889 35864651 ~ 35951415 (-)
G1689556 NA other downstream 1037896 35643368 ~ 35643777 (-)
G1689461 NA other downstream 1201616 35478114 ~ 35480057 (-)
G1690649 NA other upstream 17350 36702546 ~ 36703441 (-)
G1690696 NA other upstream 124503 36809699 ~ 36810143 (-)
G1691432 NA other upstream 553631 37238827 ~ 37239310 (-)
G1692288 cnrg other upstream 1797699 38478761 ~ 38485362 (-)

Expression


Co-expression Network