G1690576


Basic Information

Item Value
gene id G1690576
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 36735218 ~ 36736536 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1933645
aaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttgggatatgtctctatcagttttgcacatcgagagactgacattttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattttcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagacaccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacgacactttttatggatgtctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcgtctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcactattatcgcttgcacagtgctcctcgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacaagcctggtgtgttccttgttctccatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatccttattgaacttctggagagagttttctgcactgaaagtaaaggggctgagtaattttgcacgcccaatatttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattg

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1933645 True 1319 lncRNA 0.43 1 36735218 36736536

Neighbor

gene id symbol gene type direction distance location
LOC118942015 LOC106589862 coding upstream 151128 36578726 ~ 36592198 (+)
LOC110499435 LOC106589861 coding upstream 170388 36468873 ~ 36564830 (+)
LOC110499434 LOC106589860 coding upstream 194313 36437205 ~ 36540905 (+)
LOC118942466 NA coding upstream 311357 36423746 ~ 36423861 (+)
LOC110499432 LOC106589856 coding upstream 487706 36207378 ~ 36247512 (+)
LOC110499437 nogg3 coding downstream 110767 36847303 ~ 36849071 (+)
LOC118942468 NA coding downstream 167294 36903830 ~ 36903945 (+)
LOC118942068 NA coding downstream 170114 36906650 ~ 36909570 (+)
LOC110499440 NA coding downstream 177788 36914324 ~ 36916187 (+)
LOC118942467 NA coding downstream 182000 36918536 ~ 36918651 (+)
G1690574 NA non-coding upstream 3963 36731033 ~ 36731255 (+)
G1690573 NA non-coding upstream 4339 36730640 ~ 36730879 (+)
G1690565 NA non-coding upstream 24622 36710374 ~ 36710596 (+)
G1690559 NA non-coding upstream 31214 36703795 ~ 36704004 (+)
G1690558 NA non-coding upstream 32007 36702321 ~ 36703211 (+)
G1690580 NA non-coding downstream 4298 36740834 ~ 36741033 (+)
G1690589 NA non-coding downstream 20385 36756921 ~ 36757137 (+)
G1690591 NA non-coding downstream 24798 36761334 ~ 36761618 (+)
G1690593 NA non-coding downstream 26614 36763150 ~ 36763362 (+)
G1690614 NA non-coding downstream 57681 36794217 ~ 36794635 (+)
G1690116 NA other upstream 422520 36304939 ~ 36312698 (+)
G1690099 NA other upstream 459275 36275482 ~ 36275943 (+)
G1690092 NA other upstream 470237 36264660 ~ 36264981 (+)
G1689732 LOC106612293 other upstream 609828 36120616 ~ 36125390 (+)
G1689671 NA other upstream 853344 35881578 ~ 35881874 (+)
G1690753 NA other downstream 141515 36878051 ~ 36880738 (+)
G1691142 NA other downstream 805384 37541920 ~ 37543265 (+)
G1691189 NA other downstream 914090 37650626 ~ 37654064 (+)
G1691267 NA other downstream 1068007 37804543 ~ 37809061 (+)
G1691990 aatk other downstream 1485969 38222505 ~ 38222735 (+)

Expression


Co-expression Network