G1690738 (nogg3)


Basic Information

Item Value
gene id G1690738
gene name nogg3
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 36847297 ~ 36848575 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1933825
ATTTCAGTTTATTTCAGTTCGAGCAGGAGCATTTGCACTCAGATATAATGGGGTACTGAACTGGTATCCAAGCGCATTTCAGACCTCCTTTTCTCTGCAGGCACCTCCATCTTAAGATCGTAAAATAGGCCGATTTGGCAGGTTTGCAAAGCATCCCTTCAGGGACCGAACAAGAACGCTTAGTGTAGCAGCTCCCCACCTTCACGTAGCGCGGCCAGAATCTGTTCCCGAGGTCGTTCCATGTATAAACAACTGGACAGAAGGTGTAAGACCACAGCCACAGTTGCAGCCTTCTTCTGAGTTTTTTACTGGGCTTGTGCTTCTTGCCTTGCTGGATCTCAAACTCCATGGCTTTGATCTCTTTGGGCATCGCGACGGATGGCTTCTGACGCATCTCTGAGTCGCCCAGGTCCTCGTTGCCCGAGTACTTGTCCTCTGGCGGGGTGATGGACATGAAGTGGGGGTCGAAGTGACTACCCAAGTTGGATCTTAGTTCGGTCTCGTTCAGGTCCCGTTCTTTCGGATCCAGGACAGGGTCTGGGTCCTCTTTGAGCTCCACTATAGGGAGAGTGTCGCTGGGGATGGGACGGAGGAGGTAGTAGTGTTGGCACATGCCCTCCTCTATCCTAAACCCGAGGGACAGAACCAGCATGGACATGGCCAGGAAACAGTACGAGTTATCCATATCTCTATCTGGTAACAATAGTTCCAAATGATATAGAGTACAATATAAAAAGTAGAATCCTTATACGGTAGAAACGATCATCCGTTTTCCCCCGGGGGTcggtgtaagtgtgtgtgcgtgtggagtCCCGTGGCACCCCGTAGTCCAGCGCCCGTCGTCACGCACGCGCTCCAACCGGTGATCTGTTTCTCAAACTCCGCGAAAAAACATGCCTCAAAAAGTTTCAGCTGGCTGGAATTTAGTCACCATAGCAACCGGTGATTGCAGTCTGAGAGAGGAAAGTTGATGCCCTGAGCCAGTGGAGAGTTTCGCTGCGTAACTTTAGAGTCCATGACACACGTCTGAATGGATAGAACGTAGCCCTTCACTGCCTTCACTGGAAGAAAAAAACGCACATTCAAAGCACTTTCAACGAAAACGTTATACCAGACCCAGCGGTGTCAGTAGCATGATTCGCCCTGGCTGCATTTCCACTGGGCTTTCCCGTGCGTAAAGTGCGTCAGGTCCTGGTTTCTCACTAGTCTTAGAGTTGGGTCCTGTTGGTTTCTGGGTGTCCGCATGTTGTCTAGGGCTAGATGATGCACTGGCCGTTGC

Function

NR:

description
noggin-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1933825 True 1279 lncRNA 0.51 1 36847297 36848575

Neighbor

gene id symbol gene type direction distance location
LOC110499436 LOC106589862 coding downstream 254533 36583534 ~ 36592764 (-)
LOC110499433 LOC106589859 coding downstream 459625 36344254 ~ 36387672 (-)
LOC110499540 LOC106589857 coding downstream 510845 36258019 ~ 36336452 (-)
LOC110499429 LOC106589855 coding downstream 650847 36181083 ~ 36196450 (-)
LOC110499427 LOC106612293 coding downstream 721860 36120507 ~ 36125437 (-)
LOC110499438 LOC106589865 coding upstream 43271 36891846 ~ 36896982 (-)
LOC110499441 LOC106589863 coding upstream 71603 36920178 ~ 36935086 (-)
LOC118942469 NA coding upstream 97691 36946266 ~ 36946381 (-)
LOC110499443 rbfox3 coding upstream 207378 37055953 ~ 37197149 (-)
LOC110499449 LOC106589899 coding upstream 1368302 38216877 ~ 38320114 (-)
G1690727 NA non-coding downstream 9679 36836972 ~ 36837618 (-)
G1690710 NA non-coding downstream 19605 36827439 ~ 36827692 (-)
G1690695 NA non-coding downstream 33385 36811931 ~ 36813912 (-)
G1690694 NA non-coding downstream 43188 36803821 ~ 36804109 (-)
G1690693 NA non-coding downstream 48273 36798733 ~ 36799024 (-)
G1690831 NA non-coding upstream 39483 36888058 ~ 36924407 (-)
G1690859 NA non-coding upstream 95946 36944521 ~ 36944875 (-)
G1690877 NA non-coding upstream 128422 36976997 ~ 36977343 (-)
G1690880 LOC106589867 non-coding upstream 133954 36982529 ~ 36982995 (-)
G1690881 NA non-coding upstream 135093 36983668 ~ 36983905 (-)
G1690696 NA other downstream 37154 36809699 ~ 36810143 (-)
G1690649 NA other downstream 143856 36702546 ~ 36703441 (-)
G1690367 NA other downstream 426697 36418789 ~ 36420600 (-)
LOC110499416 dnah17 other downstream 980513 35864651 ~ 35951415 (-)
G1691432 NA other upstream 390252 37238827 ~ 37239310 (-)
G1692288 cnrg other upstream 1634320 38478761 ~ 38485362 (-)
oxld1 LOC106589895 other upstream 1640975 38489508 ~ 38492111 (-)
G1692405 NA other upstream 1718805 38567380 ~ 38568189 (-)

Expression


Co-expression Network