G1690804


Basic Information

Item Value
gene id G1690804
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 36986267 ~ 36986774 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1933909
tagggtgtcatttagggcgCAGACAATATTCTTTCATTGTGAATGTAACCTaccatgtataatacaacaataggACCAGCTGTACTGAACGTGAGCTGCAAAATCCAACACATACAGTAATTCCACATGGAGCTTTTCCTTTTTAAATGGTGTTGTTTGGATAAAATAAACAATGCATACAGTATATGATTGTACCAAAATCATATCAAGTTTGacgaaaaaaaaaaagtatatatttttgttgttgccacAATCCAGTATTCACTTTCCATGAAACCTCAAATCATTTAGTGTGTCAAGGATGGTTTCCCAATATTCTGTTTATACAAGTTGATGACAGCCAATCAGATGAAGAAGTCCCTAGAACTCATTATTAGCCTCAAAGGCCAGGGCCCCATTCCAAACCAAACCCTCACACCCTATTCACGGGTCCTACTTGACTTCCCCTCATGGCTTTTGAATGGCAGGTCAAgtaatttatactgaacaaaaatctaaatgtaacatg

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1933909 True 508 lncRNA 0.37 1 36986267 36986774

Neighbor

gene id symbol gene type direction distance location
LOC110499442 LOC106589867 coding upstream 707 36965177 ~ 36985560 (+)
LOC118942467 NA coding upstream 67616 36918536 ~ 36918651 (+)
LOC110499440 NA coding upstream 70080 36914324 ~ 36916187 (+)
LOC118942068 NA coding upstream 76697 36906650 ~ 36909570 (+)
LOC118942468 NA coding upstream 82322 36903830 ~ 36903945 (+)
LOC110499446 LOC106589902 coding downstream 1089199 38075973 ~ 38081270 (+)
LOC110499447 LOC106589900 coding downstream 1097121 38083895 ~ 38203970 (+)
LOC110499600 NA coding downstream 1593961 38580735 ~ 38594305 (+)
LOC110499544 mkk6c coding downstream 1608045 38594819 ~ 38638772 (+)
LOC118942016 NA coding downstream 1652821 38639595 ~ 38640649 (+)
G1690810 NA non-coding upstream 12356 36973693 ~ 36973911 (+)
G1690801 NA non-coding upstream 29074 36955848 ~ 36957193 (+)
G1690772 NA non-coding upstream 69851 36906936 ~ 36916416 (+)
G1690757 NA non-coding upstream 101269 36883996 ~ 36884998 (+)
G1690747 NA non-coding upstream 125841 36858779 ~ 36860426 (+)
G1690805 NA non-coding downstream 301 36987075 ~ 36987231 (+)
G1690931 NA non-coding downstream 55462 37042236 ~ 37042577 (+)
G1690938 NA non-coding downstream 63525 37050299 ~ 37050528 (+)
G1690939 NA non-coding downstream 67003 37053777 ~ 37055465 (+)
G1690950 NA non-coding downstream 82921 37069695 ~ 37070886 (+)
G1690753 NA other upstream 105529 36878051 ~ 36880738 (+)
G1690116 NA other upstream 673569 36304939 ~ 36312698 (+)
G1690099 NA other upstream 710324 36275482 ~ 36275943 (+)
G1690092 NA other upstream 721286 36264660 ~ 36264981 (+)
G1689732 LOC106612293 other upstream 860877 36120616 ~ 36125390 (+)
G1691142 NA other downstream 555146 37541920 ~ 37543265 (+)
G1691189 NA other downstream 663852 37650626 ~ 37654064 (+)
G1691267 NA other downstream 817769 37804543 ~ 37809061 (+)
G1691990 aatk other downstream 1235731 38222505 ~ 38222735 (+)
G1691992 NA other downstream 1241241 38228015 ~ 38228551 (+)

Expression


Co-expression Network